RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 HIST1H2BJP06899 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BOP23527 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BBP33778 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BDP58876 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BCP62807 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.64
SIRPA-203ENST00000400068 ASPHD1Q5U4P2 390 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.64
SIRPA-203ENST00000400068 PRNTQ86SH4 94 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 PERPQ96FX8 193 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 SLC25A33Q9BSK2 321 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 RNASE7Q9H1E1 156 aaKnown RBP11.02□□□□□ -0.64
SIRPA-203ENST00000400068 PITPNC1Q9UKF7 332 aa11.02□□□□□ -0.64
SIRPA-203ENST00000400068 IGHV3-49A0A0A0MS15 119 aa11.02□□□□□ -0.65
SIRPA-203ENST00000400068 RBFOX2O43251 390 aaKnown RBP eCLIP11.02□□□□□ -0.65
SIRPA-203ENST00000400068 MEF2CQ06413 473 aaPredicted RBP11.02□□□□□ -0.65
SIRPA-203ENST00000400068 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
SIRPA-203ENST00000400068 KLF17Q5JT82 389 aaPredicted RBP11.02□□□□□ -0.65
SIRPA-203ENST00000400068 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
SIRPA-203ENST00000400068 GNG5P63218 68 aa11.02□□□□□ -0.65
SIRPA-203ENST00000400068 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
SIRPA-203ENST00000400068 BEND2Q8NDZ0 799 aa11.02□□□□□ -0.65
SIRPA-203ENST00000400068 TMEM133Q9H2Q1 129 aa11.02□□□□□ -0.65
SIRPA-203ENST00000400068 CA1P00915 261 aaPredicted RBP11.01□□□□□ -0.65
SIRPA-203ENST00000400068 HLA-DRB5Q30154 266 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
SIRPA-203ENST00000400068 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 CACNG8Q8WXS5 425 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 FRYQ5TBA9 3013 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 FCGR2BP31994 310 aaPredicted RBP11.01□□□□□ -0.65
SIRPA-203ENST00000400068 UBE2V1Q13404 147 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
SIRPA-203ENST00000400068 F2RL2O00254 374 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 COL8A1P27658 744 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 RBX1P62877 108 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 PRCDQ00LT1 54 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
SIRPA-203ENST00000400068 ID1P41134 155 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 LOXL3P58215 753 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 PSG1P11464 419 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 CNTFRP26992 372 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 GAGE1Q13065 139 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 ANAPC13Q9BS18 74 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
SIRPA-203ENST00000400068 CGB1A6NKQ9 187 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 TGFAP01135 160 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 GCGP01275 180 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 OR1P1Q8NH06 330 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 DYSFO75923 2080 aa11□□□□□ -0.65
SIRPA-203ENST00000400068 TIMM23O14925 209 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 IGHV1-8P0DP01 117 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 LGALS7P47929 136 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 TPSG1Q9NRR2 321 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 ARL2-SNX15V9GYD0 113 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 BOD1L1Q8NFC6 3051 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 IGLV3-9A0A075B6K5 115 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 K7ENP7 123 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 SLC25A48Q6ZT89 311 aaKnown RBP10.99□□□□□ -0.65
SIRPA-203ENST00000400068 TUBA4BQ9H853 241 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 HCFC1P51610 2035 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 IGHV3-66A0A0C4DH42 116 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 H0YJW9 148 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 AREGP15514 252 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 CCKARP32238 428 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 CD69Q07108 199 aa10.99□□□□□ -0.65
SIRPA-203ENST00000400068 FOXA2Q9Y261 457 aaPredicted RBP10.99□□□□□ -0.65
SIRPA-203ENST00000400068 TPPP2P59282 170 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 LY6EQ16553 131 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 LINC00479Q96M42 142 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
SIRPA-203ENST00000400068 PRDM13Q9H4Q3 707 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
SIRPA-203ENST00000400068 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 OR2J3O76001 311 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 P01737 135 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 IL4P05112 153 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 DPM3Q9P2X0 92 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-203ENST00000400068 A0A087WWC5 75 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 IGHV2-26A0A0B4J1V2 119 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 SRSF12Q8WXF0 261 aaKnown RBP10.98□□□□□ -0.65
SIRPA-203ENST00000400068 ASCL2Q99929 193 aa10.98□□□□□ -0.65
SIRPA-203ENST00000400068 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-203ENST00000400068 GOLT1AQ6ZVE7 132 aa10.97□□□□□ -0.65
SIRPA-203ENST00000400068 PPP1R27Q86WC6 154 aa10.97□□□□□ -0.65
SIRPA-203ENST00000400068 WNT10AQ9GZT5 417 aa10.97□□□□□ -0.65
SIRPA-203ENST00000400068 SELENOTP62341 195 aa10.97□□□□□ -0.65
SIRPA-203ENST00000400068 LYRM7Q5U5X0 104 aa10.97□□□□□ -0.65
SIRPA-203ENST00000400068 ODF3L1Q8IXM7 274 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms