RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 UNQ5815/PRO19632Q6UWF5 114 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 OR10P1Q8NGE3 313 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 CYB5BO43169 146 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 ZNF90Q03938 601 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 EBI3Q14213 229 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 SSX7Q7RTT5 188 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 OR5B3Q8NH48 314 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 SLC25A31Q9H0C2 315 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 KLK15Q9H2R5 256 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 A6NDX4 124 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 GATA3P23771 443 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 FAM216AQ8WUB2 273 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 PARD6GQ9BYG4 376 aaPredicted RBP9.18□□□□□ -0.94
SKA3-203ENST00000400018 FAM90A26D6RGX4 464 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 PRSS46E5RG02 174 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 IGHV3-11P01762 117 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 RPLP1P05386 114 aaKnown RBP9.18□□□□□ -0.94
SKA3-203ENST00000400018 HNF1AP20823 631 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 GUK1Q16774 197 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 FRZBQ92765 325 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 MT-CO2P00403 227 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 ELOBQ15370 118 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 MIC13Q5XKP0 118 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 TREML4Q6UXN2 200 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 ATP5SQ99766 215 aa9.18□□□□□ -0.94
SKA3-203ENST00000400018 NOTCH3Q9UM47 2321 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 TGOLN2O43493 480 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 CD5LO43866 347 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 TSPAN15O95858 294 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 HSPB1P04792 205 aaKnown RBP9.17□□□□□ -0.94
SKA3-203ENST00000400018 FGF8P55075 233 aaPredicted RBP9.17□□□□□ -0.94
SKA3-203ENST00000400018 ERHP84090 104 aaKnown RBP9.17□□□□□ -0.94
SKA3-203ENST00000400018 ZNF562Q6V9R5 426 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 OR52E5Q8NH55 327 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 ZNF257Q9Y2Q1 563 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 J3QLI3 93 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 NDUFB8O95169 186 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 RPL29P47914 159 aaKnown RBP9.17□□□□□ -0.94
SKA3-203ENST00000400018 SULT1A2P50226 295 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 RND2P52198 227 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 OR2G3Q8NGZ4 309 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
SKA3-203ENST00000400018 CD99P14209 185 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 S100A7P31151 101 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 EIF5AP63241 154 aaKnown RBP9.16□□□□□ -0.94
SKA3-203ENST00000400018 ACSM6Q6P461 480 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 Q6YL49 198 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 MGST2Q99735 147 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 OOSP1A8MZH6 123 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 ZNF616Q08AN1 781 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 FKBP11Q9NYL4 201 aa9.16□□□□□ -0.94
SKA3-203ENST00000400018 DNAJC9-AS1A6NH13 148 aa9.15□□□□□ -0.94
SKA3-203ENST00000400018 SCAF4O95104 1147 aaKnown RBP9.15□□□□□ -0.94
SKA3-203ENST00000400018 TRBV12-3P01733 135 aa9.15□□□□□ -0.94
SKA3-203ENST00000400018 TEX38Q6PEX7 206 aa9.15□□□□□ -0.94
SKA3-203ENST00000400018 C18orf65Q6ZTR6 163 aa9.15□□□□□ -0.94
SKA3-203ENST00000400018 UHRF2Q96PU4 802 aa9.15□□□□□ -0.94
SKA3-203ENST00000400018 CIB3Q96Q77 187 aaPredicted RBP9.15□□□□□ -0.94
SKA3-203ENST00000400018 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.95
SKA3-203ENST00000400018 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.95
SKA3-203ENST00000400018 AMBPP02760 352 aa9.15□□□□□ -0.95
SKA3-203ENST00000400018 SPATA31B1PQ5VZV4 182 aa9.15□□□□□ -0.95
SKA3-203ENST00000400018 FAM213BQ8TBF2 198 aa9.15□□□□□ -0.95
SKA3-203ENST00000400018 ELOVL1Q9BW60 279 aa9.15□□□□□ -0.95
SKA3-203ENST00000400018 ACTR3CQ9C0K3 210 aaPredicted RBP9.15□□□□□ -0.95
SKA3-203ENST00000400018 WDR61Q9GZS3 305 aaKnown RBP9.15□□□□□ -0.95
SKA3-203ENST00000400018 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
SKA3-203ENST00000400018 OR10J1P30954 320 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 CEBPGP53567 150 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 CCL20P78556 96 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 MORN5Q5VZ52 161 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 SLC35E3Q7Z769 313 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 OR4A5Q8NH83 315 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 DUX3Q96PT4 197 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 F11RQ9Y624 299 aaKnown RBP9.14□□□□□ -0.95
SKA3-203ENST00000400018 HAX1O00165 279 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 HLA-DRB1P01911 266 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 ERVFC1-1P60608 527 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 RAB11AP62491 216 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 HBG1P69891 147 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 HBG2P69892 147 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 OR5I1Q13606 314 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 BATFQ16520 125 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 BSXQ3C1V8 233 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 PDLIM3Q53GG5 364 aaPredicted RBP9.14□□□□□ -0.95
SKA3-203ENST00000400018 LEMD1Q68G75 181 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 EIF5AL1Q6IS14 154 aaKnown RBP9.14□□□□□ -0.95
SKA3-203ENST00000400018 NPCDR1Q9BY65 106 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 SLC25A22Q9H936 323 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 DNAJC4Q9NNZ3 241 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 C1RLQ9NZP8 487 aa9.14□□□□□ -0.95
SKA3-203ENST00000400018 SORL1Q92673 2214 aa9.13□□□□□ -0.95
SKA3-203ENST00000400018 IGHV3-49A0A0A0MS15 119 aa9.13□□□□□ -0.95
SKA3-203ENST00000400018 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms