RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 HIST1H2BDP58876 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 DSCR9P59020 149 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BCP62807 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST2H2BEQ16778 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 OR1N2Q8NGR9 330 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BHQ93079 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BNQ99877 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BMQ99879 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 ACACBO00763 2458 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 YLPM1P49750 1951 aaKnown RBP11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 M0R381 172 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 PSG1P11464 419 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 PSMB2P49721 201 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 KLRD1Q13241 179 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 FNDC10F2Z333 226 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 MYOD1P15172 320 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 FAM74A4Q5TZK3 123 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 PRSS22Q9GZN4 317 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 PPP1R17O96001 155 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 FAM209BQ5JX69 171 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 OR4X2Q8NGF9 303 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 F11RQ9Y624 299 aaKnown RBP11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 DOCK11Q5JSL3 2073 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 IGKV1-16P04430 117 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 MOB4Q9Y3A3 225 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 C9JCJ5 164 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 ZNF56Q15929 161 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 KCNS1Q96KK3 526 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
PCDHGA11-201ENST00000398587 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 CEACAM4O75871 244 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 APOHP02749 345 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 RNASE2P10153 161 aaKnown RBP11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 TDGF1P13385 188 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 AREGP15514 252 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 NBL1P41271 181 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 HINT1P49773 126 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 ORMDL3Q8N138 153 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 ATOH7Q8N100 152 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 Q8NFD4 153 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 KLK15Q9H2R5 256 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 PRTN3P24158 256 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 CRIM1Q9NZV1 1036 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 C5orf52A6NGY3 159 aa11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA11-201ENST00000398587 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 SERF1AO75920 110 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 MUC21Q5SSG8 566 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 TRAV41A0A0B4J266 112 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 LY6HO94772 140 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 SOD3P08294 240 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 ZNF414Q96IQ9 312 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 TMEM50AO95807 157 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
PCDHGA11-201ENST00000398587 NUTF2P61970 127 aaKnown RBP11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 FOXL1Q12952 345 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 C15orf32Q32M92 178 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 REC114Q7Z4M0 266 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 TMEM238LA0A1B0GVL6 79 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 A6NJY4 79 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 PAX8Q06710 450 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 MST1LQ2TV78 715 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 SLC25A39Q9BZJ4 359 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 CXCL1P09341 107 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 PAX1P15863 534 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 ADMP35318 185 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 SPSB3Q6PJ21 355 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 C1QL4Q86Z23 238 aa11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 ZNF324O75467 553 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA11-201ENST00000398587 B4DSR2 109 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 PAX9P55771 341 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 FAM19A2Q8N3H0 131 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 LY96Q9Y6Y9 160 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 SPG11Q96JI7 2443 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 H7C1H1 209 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 DERL1Q9BUN8 251 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 UBE2CO00762 179 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 ATP5LO75964 103 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 ZNF418Q8TF45 676 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 PMCHL2Q9BQD1 86 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 SRSF8Q9BRL6 282 aaKnown RBP11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 DCAF16Q9NXF7 216 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 LINC00527Q9UJ94 153 aa11.58□□□□□ -0.56
PCDHGA11-201ENST00000398587 C7orf71A4D174 169 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms