RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 BBC3Q96PG8 261 aaPredicted RBP12.05□□□□□ -0.48
MBD1-209ENST00000398495 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 RASL11BQ9BPW5 248 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 A0A0U1RQK1 487 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 NPFFO15130 113 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 GP9P14770 177 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 OR1L6Q8NGR2 347 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 HIGD1AQ9Y241 93 aa12.05□□□□□ -0.48
MBD1-209ENST00000398495 POLR3KQ9Y2Y1 108 aaPredicted RBP12.05□□□□□ -0.48
MBD1-209ENST00000398495 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
MBD1-209ENST00000398495 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
MBD1-209ENST00000398495 PPP5D1E7EU14 171 aa12.04□□□□□ -0.48
MBD1-209ENST00000398495 FAM106CPP0CH98 169 aa12.04□□□□□ -0.48
MBD1-209ENST00000398495 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
MBD1-209ENST00000398495 BLNKQ8WV28 456 aa12.04□□□□□ -0.48
MBD1-209ENST00000398495 FLNCQ14315 2725 aa12.04□□□□□ -0.48
MBD1-209ENST00000398495 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
MBD1-209ENST00000398495 CENPVL3A0A0U1RRI6 287 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 SLC17A3O00476 420 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 IGLV2-8P01709 118 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 TTC9CQ8N5M4 171 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 LINC00479Q96M42 142 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 IGHV3OR16-10A0A075B7F0 116 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 VWC2LB2RUY7 222 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 TYMSP04818 313 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 HOXA5P20719 270 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 MYCNOSP40205 109 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 GNG5P63218 68 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 STXBP6Q8NFX7 210 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 SGMS2Q8NHU3 365 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 IMMP2LQ96T52 175 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
MBD1-209ENST00000398495 H3BTX0 84 aa12.02□□□□□ -0.48
MBD1-209ENST00000398495 PEX7O00628 323 aa12.02□□□□□ -0.48
MBD1-209ENST00000398495 RD3LP0DJH9 198 aa12.02□□□□□ -0.48
MBD1-209ENST00000398495 ATP5J2P56134 94 aa12.02□□□□□ -0.48
MBD1-209ENST00000398495 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.48
MBD1-209ENST00000398495 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
MBD1-209ENST00000398495 ZNF98A6NK75 572 aa12.02□□□□□ -0.49
MBD1-209ENST00000398495 IFITM10A6NMD0 228 aa12.02□□□□□ -0.49
MBD1-209ENST00000398495 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
MBD1-209ENST00000398495 PAX8Q06710 450 aa12.02□□□□□ -0.49
MBD1-209ENST00000398495 C12orf57Q99622 126 aa12.02□□□□□ -0.49
MBD1-209ENST00000398495 SLC25A39Q9BZJ4 359 aaPredicted RBP12.02□□□□□ -0.49
MBD1-209ENST00000398495 IGHV4-30-2A0A087WSY4 118 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 HLA-DRB1P01911 266 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 BRS3P32247 399 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 FOXL1Q12952 345 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 ACTL10Q5JWF8 245 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 CLEC2AQ6UVW9 174 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 IL36BQ9NZH7 164 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 MRPL27Q9P0M9 148 aaKnown RBP12.01□□□□□ -0.49
MBD1-209ENST00000398495 V9GYV3 84 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 CACNA1BQ00975 2339 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 TRAV34A0A0B4J273 112 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 F8W735 103 aaPredicted RBP12.01□□□□□ -0.49
MBD1-209ENST00000398495 NDUFB8O95169 186 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 TOMM40O96008 361 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 NBEAP1P0C6P0 100 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 MEOX2P50222 304 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 CNN1P51911 297 aaKnown RBP12.01□□□□□ -0.49
MBD1-209ENST00000398495 ERVFC1-1P60608 527 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 GFI1BQ5VTD9 330 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 NHLRC2Q8NBF2 726 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
MBD1-209ENST00000398495 C1RLQ9NZP8 487 aa12.01□□□□□ -0.49
MBD1-209ENST00000398495 ABCA1O95477 2261 aa12□□□□□ -0.49
MBD1-209ENST00000398495 GCGP01275 180 aa12□□□□□ -0.49
MBD1-209ENST00000398495 IGHV3-23P01764 117 aa12□□□□□ -0.49
MBD1-209ENST00000398495 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
MBD1-209ENST00000398495 NRGNQ92686 78 aa12□□□□□ -0.49
MBD1-209ENST00000398495 CDC42EP3Q9UKI2 254 aa12□□□□□ -0.49
MBD1-209ENST00000398495 SH2D7A6NKC9 451 aaPredicted RBP11.99□□□□□ -0.49
MBD1-209ENST00000398495 NDUFS8O00217 210 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 OR2J3O76001 311 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 S100A8P05109 93 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
MBD1-209ENST00000398495 FABP1P07148 127 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 MGST1P10620 155 aaKnown RBP11.99□□□□□ -0.49
MBD1-209ENST00000398495 CDX1P47902 265 aaPredicted RBP11.99□□□□□ -0.49
MBD1-209ENST00000398495 MFAP4P55083 255 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 TAS2R60P59551 318 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
MBD1-209ENST00000398495 EPDR1Q9UM22 224 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 PGPA6NDG6 321 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 H3BRN7 92 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 ISLRO14498 428 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 GNG7O60262 68 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
MBD1-209ENST00000398495 SHANK2-AS3Q9BTD1 123 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 RPH3ALQ9UNE2 315 aa11.99□□□□□ -0.49
MBD1-209ENST00000398495 IGHV1-69DA0A0B4J2H0 117 aa11.98□□□□□ -0.49
MBD1-209ENST00000398495 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
MBD1-209ENST00000398495 IGHV1-69P01742 117 aa11.98□□□□□ -0.49
MBD1-209ENST00000398495 IL4P05112 153 aa11.98□□□□□ -0.49
MBD1-209ENST00000398495 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms