RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TMEM238C9JI98 176 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 C15orf62A8K5M9 175 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 OR11H12B2RN74 326 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRSS46E5RG02 174 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 IGLV2-14P01704 120 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PSG7Q13046 419 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 KIR3DS1Q14943 382 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 SPANXN1Q5VSR9 72 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 MBNL2Q5VZF2 373 aaKnown RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 FAM71F2Q6NXP2 309 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 Q8N7P7 452 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 OR11H1Q8NG94 326 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 OR11H2Q8NH07 326 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 OSR1Q8TAX0 266 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 MRPL32Q9BYC8 188 aaKnown RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 TRGV5A0A0B4J1U4 118 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 CD5LO43866 347 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 PRB4P10163 310 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-205ENST00000397611 MEOX1P50221 254 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 C8orf31Q8N9H6 132 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 TECTAO75443 2155 aa4.5□□□□□ -1.69
PTPRD-205ENST00000397611 TRAV8-2A0A0B4J237 113 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 LRRC10Q5BKY1 277 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 SPINK14Q6IE38 97 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 IGFL2Q6UWQ7 119 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 C20orf204Q6ZNR8 217 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 C1orf210Q8IVY1 113 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TSKUQ8WUA8 353 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 CLEC7AQ9BXN2 247 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 A0A0G2JMM0 328 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 A0A1W2PPB8 328 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 KIR3DP1A8MWS1 328 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 PRR33A8MZF0 331 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 AHRRA9YTQ3 701 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 RAB9AP51151 201 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 FXYD7P58549 80 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 PSG9Q00887 426 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 ADAMTSL5Q6ZMM2 481 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 LINC00305Q7Z4B0 112 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 DKK4Q9UBT3 224 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 ANKRD11Q6UB99 2663 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-205ENST00000397611 CACNA1BQ00975 2339 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 PRDX2P32119 198 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 GLRXP35754 106 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 MPV17P39210 176 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 COQ2Q96H96 371 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 CYSLTR1Q9Y271 337 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 MAGEA5P43359 124 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 IGF2-ASQ6U949 168 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TREML4Q6UXN2 200 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 ACP7Q6ZNF0 438 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TNFRSF19Q9NS68 423 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TSSC4Q9Y5U2 329 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TRBV20OR9-2A0A075B6H5 130 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 IGLV3-9A0A075B6K5 115 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TM4SF5O14894 197 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 PSPNO60542 156 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 RAMP3O60896 148 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 NDUFA3O95167 84 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TNFAIP6P98066 277 aaPredicted RBP4.49□□□□□ -1.69
PTPRD-205ENST00000397611 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 GGTLC1Q9BX51 225 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 MRPL27Q9P0M9 148 aaKnown RBP4.49□□□□□ -1.69
PTPRD-205ENST00000397611 TEX43Q6ZNM6 134 aa4.49□□□□□ -1.69
PTPRD-205ENST00000397611 KLRB1Q12918 225 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 CT83Q5H943 113 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 FER1L6-AS1Q8NA97 138 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 ARRDC1-AS1Q9H2J1 176 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 ONECUT1Q9UBC0 465 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 TRAV5A0A0B4J249 113 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 PROP1O75360 226 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 LEPP41159 167 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 MEF2CQ06413 473 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 KLF14Q8TD94 323 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 CYYR1Q96J86 154 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 HS3ST6Q96QI5 342 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 MS4A6AQ9H2W1 248 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 FOXH1O75593 365 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 PYYP10082 97 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 WIPF2Q8TF74 440 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 NEUROG1Q92886 237 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 TNFRSF14Q92956 283 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 CHCHD1Q96BP2 118 aaKnown RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 COLQQ9Y215 455 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 IGHV3-72A0A0B4J1Y9 119 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 C9orf172C9J069 976 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 DDB2Q92466 427 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 TIMD4Q96H15 378 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 ZNF714Q96N38 554 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 SH2D7A6NKC9 451 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 CRXO43186 299 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-205ENST00000397611 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 PRTN3P24158 256 aa4.48□□□□□ -1.69
PTPRD-205ENST00000397611 BCL6BQ8N143 479 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms