RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 NCOA6Q14686 2063 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-204ENST00000397545 CRXO43186 299 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-204ENST00000397545 NTF4P34130 210 aa8.89□□□□□ -0.99
CCDC40-204ENST00000397545 SRSF6Q13247 344 aaKnown RBP8.89□□□□□ -0.99
CCDC40-204ENST00000397545 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
CCDC40-204ENST00000397545 IGHV1-18A0A0C4DH31 117 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 C17orf100A8MU93 164 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 GPR183P32249 361 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 EPG5Q9HCE0 2579 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 WDFY3Q8IZQ1 3526 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 ARHGAP21Q5T5U3 1957 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 PET117Q6UWS5 81 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-204ENST00000397545 DPM3Q9P2X0 92 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 EPDR1Q9UM22 224 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-204ENST00000397545 NTN3O00634 580 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-204ENST00000397545 GPX1P07203 203 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 LY6DQ14210 128 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 ZNF585BQ52M93 769 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 NIT1Q86X76 327 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 MGST2Q99735 147 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 NAA38Q9BRA0 125 aaKnown RBP8.88□□□□□ -0.99
CCDC40-204ENST00000397545 PRO3102Q9H379 93 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 CRIM1Q9NZV1 1036 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 LINC00312Q9Y6C7 94 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 A0A1W2PRE2 83 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 NPPCP23582 126 aa8.88□□□□□ -0.99
CCDC40-204ENST00000397545 C1orf162Q8NEQ5 155 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-204ENST00000397545 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 HIST1H1AQ02539 215 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-204ENST00000397545 CD177Q8N6Q3 437 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 LINC00479Q96M42 142 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 MCRIP2Q9BUT9 160 aaKnown RBP8.87□□□□□ -0.99
CCDC40-204ENST00000397545 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
CCDC40-204ENST00000397545 TM4SF5O14894 197 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 FAM90A1Q86YD7 464 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 COQ2Q96H96 371 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 BEX4Q9NWD9 120 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-204ENST00000397545 C21orf62Q9NYP8 219 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 IGHV3OR16-12A0A075B7B8 117 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 A0A1B0GW64 132 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 B3GALT5-AS1P59052 145 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 PRCDQ00LT1 54 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 DMRTC2Q8IXT2 367 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-204ENST00000397545 ABHD17AQ96GS6 310 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 FBXL7Q9UJT9 491 aa8.87□□□□□ -0.99
CCDC40-204ENST00000397545 TNCP24821 2201 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 ABCA2Q9BZC7 2435 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 OR11H12B2RN74 326 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 SRRM5B3KS81 715 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 C9JCJ5 164 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 DLX6P56179 175 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 PSG9Q00887 426 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 RSPO1Q2MKA7 263 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-204ENST00000397545 Q6P435 159 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 OR11H1Q8NG94 326 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 OR11H2Q8NH07 326 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 RNASEH2CQ8TDP1 164 aaKnown RBP8.86□□□□□ -0.99
CCDC40-204ENST00000397545 FOXC2Q99958 501 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 PROK2Q9HC23 129 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 ELOVL5Q9NYP7 299 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 C15orf62A8K5M9 175 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 H3BUT2 72 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 NUDT10Q8NFP7 164 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 NUDT11Q96G61 164 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 RPS20P60866 119 aaKnown RBP8.86□□□□□ -0.99
CCDC40-204ENST00000397545 TMEM30BQ3MIR4 351 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 ALKBH7Q9BT30 221 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-204ENST00000397545 FREM2Q5SZK8 3169 aa8.86□□□□□ -0.99
CCDC40-204ENST00000397545 TRAV9-1A0A075B6T8 112 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 TRAV8-1A0A0A6YYK1 113 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 SS18L1O75177 396 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-204ENST00000397545 LINC00614P0C842 121 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 APOBEC3AP31941 199 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-204ENST00000397545 FOXL1Q12952 345 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 PPP1R27Q86WC6 154 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 ZNRD1Q9P1U0 126 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 C19orf67A6NJJ6 358 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 B9A039 149 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 ETV2O00321 342 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-204ENST00000397545 TNFSF13O75888 250 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 TYMSP04818 313 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 ZNF138P52744 262 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 FXYD7P58549 80 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 DKK1O94907 266 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 PAX9P55771 341 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 ORMDL3Q8N138 153 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 EXOC3-AS1Q8N2X6 119 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 FNDC4Q9H6D8 234 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-204ENST00000397545 RPUSD1Q9UJJ7 312 aaKnown RBP8.85□□□□□ -0.99
CCDC40-204ENST00000397545 TCRBV4S1A1TA0A5B7 111 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 TGFAP01135 160 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 IGHV1-46P01743 117 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 CFPP27918 469 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 MEF2CQ06413 473 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms