RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NDUFA7O95182 113 aa21.26■□□□□ 0.99
CPNE1-203ENST00000397442 PLP1P60201 277 aa21.26■□□□□ 0.99
CPNE1-203ENST00000397442 PATE2Q6UY27 113 aa21.26■□□□□ 0.99
CPNE1-203ENST00000397442 SEPSECSQ9HD40 501 aaKnown RBP21.26■□□□□ 0.99
CPNE1-203ENST00000397442 MAST4O15021 2626 aa21.26■□□□□ 0.99
CPNE1-203ENST00000397442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.25■□□□□ 0.99
CPNE1-203ENST00000397442 NUPL2O15504 423 aaKnown RBP21.25■□□□□ 0.99
CPNE1-203ENST00000397442 TGOLN2O43493 480 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 FABP1P07148 127 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 H2AFB1P0C5Y9 115 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 ZNF491Q8N8L2 437 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 MBD3L1Q8WWY6 194 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 RAB24Q969Q5 203 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 HRH4Q9H3N8 390 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 DOK5Q9P104 306 aa21.25■□□□□ 0.99
CPNE1-203ENST00000397442 LINC00862A6NCI5 91 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 TRBV12-3P01733 135 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 SPSB3Q6PJ21 355 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 COMMD1Q8N668 190 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 OR51G1Q8NGK1 321 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 ACTR3CQ9C0K3 210 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-203ENST00000397442 PPP5D1E7EU14 171 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 TEX46H3BTG2 121 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 CDC34P49427 236 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-203ENST00000397442 TCTEX1D4Q5JR98 221 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 OR5AU1Q8NGC0 362 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 OR4X2Q8NGF9 303 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 SFT2D1Q8WV19 159 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 DNAJC4Q9NNZ3 241 aa21.24■□□□□ 0.99
CPNE1-203ENST00000397442 CTXND1A0A1B0GTU2 59 aa21.23■□□□□ 0.99
CPNE1-203ENST00000397442 SCGB2A1O75556 95 aa21.23■□□□□ 0.99
CPNE1-203ENST00000397442 OR5G3P0C626 314 aa21.23■□□□□ 0.99
CPNE1-203ENST00000397442 SPATA31B1PQ5VZV4 182 aa21.23■□□□□ 0.99
CPNE1-203ENST00000397442 GATAD1Q8WUU5 269 aa21.23■□□□□ 0.99
CPNE1-203ENST00000397442 C19orf24Q9BVV8 132 aa21.23■□□□□ 0.99
CPNE1-203ENST00000397442 WI2-2373I1.2A0A1W2PRP0 233 aa21.22■□□□□ 0.99
CPNE1-203ENST00000397442 OR2C1O95371 312 aa21.22■□□□□ 0.99
CPNE1-203ENST00000397442 ORM2P19652 201 aa21.22■□□□□ 0.99
CPNE1-203ENST00000397442 LCN15Q6UWW0 184 aa21.22■□□□□ 0.99
CPNE1-203ENST00000397442 TRAV1-1A0A0B4J248 108 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 HMGB3O15347 200 aaKnown RBP21.21■□□□□ 0.99
CPNE1-203ENST00000397442 COX7A2P2O60397 106 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 RHOBP62745 196 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 FAM78BQ5VT40 261 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 OR1B1Q8NGR6 318 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 Q8WTZ3 238 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 TEP1Q99973 2627 aaKnown RBP21.21■□□□□ 0.99
CPNE1-203ENST00000397442 NIPBLQ6KC79 2804 aaeCLIP21.21■□□□□ 0.991e-8■□□□□ 10.5
CPNE1-203ENST00000397442 IGHV3-35A0A0C4DH35 117 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 A0A1B0GV50 99 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 A0A1W2PPV4 95 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 MAP1LC3B2A6NCE7 125 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 LYZP61626 148 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 MORN5Q5VZ52 161 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 ZNF600Q6ZNG1 722 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 SLC7A5P1Q8MH63 180 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 OR1L4Q8NGR5 311 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 PFDN5Q99471 154 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 MAP1LC3BQ9GZQ8 125 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 GNB4Q9HAV0 340 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 MED9Q9NWA0 146 aa21.21■□□□□ 0.99
CPNE1-203ENST00000397442 PUS1Q9Y606 427 aaKnown RBP eCLIP21.21■□□□□ 0.99
CPNE1-203ENST00000397442 ELOA3CA0A087WX78 387 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-203ENST00000397442 IL4P05112 153 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 ARL3P36405 182 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 CCL20P78556 96 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 C10orf113Q5VZT2 155 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 RNF125Q96EQ8 232 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 UBE2E2Q96LR5 201 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 UHRF2Q96PU4 802 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 FUT9Q9Y231 359 aa21.2■□□□□ 0.98
CPNE1-203ENST00000397442 ANKRD34BA5PLL1 514 aa21.19■□□□□ 0.98
CPNE1-203ENST00000397442 HYPMO75409 117 aa21.19■□□□□ 0.98
CPNE1-203ENST00000397442 FGF8P55075 233 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-203ENST00000397442 MIR17HGQ75NE6 70 aa21.19■□□□□ 0.98
CPNE1-203ENST00000397442 OR5B12Q96R08 314 aa21.19■□□□□ 0.98
CPNE1-203ENST00000397442 MRPL27Q9P0M9 148 aaKnown RBP21.19■□□□□ 0.98
CPNE1-203ENST00000397442 USF2Q15853 346 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-203ENST00000397442 NDUFA5Q16718 116 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 PBDC1Q9BVG4 233 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 ZFAND3Q9H8U3 227 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 C2CD3Q4AC94 2353 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 BMPR1BO00238 502 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 STAG3L2P0CL84 134 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 STAG3L3P0CL85 134 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 OR4F5Q8NH21 305 aa21.18■□□□□ 0.98
CPNE1-203ENST00000397442 TOMM20LQ6UXN7 152 aa21.17■□□□□ 0.98
CPNE1-203ENST00000397442 LINC00305Q7Z4B0 112 aa21.17■□□□□ 0.98
CPNE1-203ENST00000397442 RNF2Q99496 336 aa21.17■□□□□ 0.98
CPNE1-203ENST00000397442 MRPL32Q9BYC8 188 aaKnown RBP21.17■□□□□ 0.98
CPNE1-203ENST00000397442 PEF1Q9UBV8 284 aaKnown RBP21.17■□□□□ 0.98
CPNE1-203ENST00000397442 HBE1P02100 147 aa21.16■□□□□ 0.98
CPNE1-203ENST00000397442 RELQ04864 619 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-203ENST00000397442 LGALS1P09382 135 aaKnown RBP21.15■□□□□ 0.98
CPNE1-203ENST00000397442 FAM209BQ5JX69 171 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 COMMD7Q86VX2 200 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 PFDN2Q9UHV9 154 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 HIGD1AQ9Y241 93 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 RNF114Q9Y508 228 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 SETD2Q9BYW2 2564 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms