RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 USF2Q15853 346 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-206ENST00000397408 VSIRQ9H7M9 311 aa15.91■□□□□ 0.14
TSPAN4-206ENST00000397408 TSPAN4O14817 238 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 CRYBB3P26998 211 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 ARL16Q0P5N6 197 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 OR2F1Q13607 317 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 LRRC37A5PQ49AS3 106 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 OR51G1Q8NGK1 321 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 NARS2Q96I59 477 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 SPAG8Q99932 426 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 NEURL2Q9BR09 285 aa15.9■□□□□ 0.14
TSPAN4-206ENST00000397408 FAM24AA6NFZ4 105 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 DEDDO75618 318 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 HNRNPCP07910 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 CYCSP99999 105 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 TMEM144Q7Z5S9 345 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 LILRB2Q8N423 598 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 RNF125Q96EQ8 232 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 PBDC1Q9BVG4 233 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 TMEM231Q9H6L2 316 aa15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 LYRM2Q9NU23 88 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-206ENST00000397408 A0A1W2PS18 150 aa15.88■□□□□ 0.13
TSPAN4-206ENST00000397408 IGHV4-30-4P0DP06 118 aa15.88■□□□□ 0.13
TSPAN4-206ENST00000397408 TCF24Q7RTU0 167 aa15.88■□□□□ 0.13
TSPAN4-206ENST00000397408 B9D2Q9BPU9 175 aa15.88■□□□□ 0.13
TSPAN4-206ENST00000397408 IGKV3-7A0A075B6H7 116 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 FNDC10F2Z333 226 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 CST7O76096 145 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 LYZP61626 148 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 FAM90A2PQ658T7 463 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 WFDC10AQ9H1F0 79 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 RABAC1Q9UI14 185 aa15.87■□□□□ 0.13
TSPAN4-206ENST00000397408 IGSF23A1L1A6 192 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 DFFBO76075 338 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 RLN2P04090 185 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 FRMD6-AS1P0C7T7 363 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 P2RY1P47900 373 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 SLC38A11Q08AI6 406 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 TMEM252Q8N6L7 170 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 TMEM217Q8N7C4 229 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 PPP1R1CQ8WVI7 109 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 U3KQE9 123 aa15.86■□□□□ 0.13
TSPAN4-206ENST00000397408 OR4C46A6NHA9 309 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 STX12Q86Y82 276 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 GRAMD2BQ96HH9 432 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 GGACTQ9BVM4 153 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 OR5AC2Q9NZP5 309 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 H0YIZ8 118 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 CD5P06127 495 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 TFPI2P48307 235 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 EIF2B2P49770 351 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 SULT1A1P50225 295 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 OXA1LQ15070 435 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 GBGT1Q8N5D6 347 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 MED28Q9H204 178 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 NPVFQ9HCQ7 196 aa15.85■□□□□ 0.13
TSPAN4-206ENST00000397408 OR11H12B2RN74 326 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 E5RGE8 158 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 CXCL3P19876 107 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 GATA2P23769 480 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 RPL11P62913 178 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 TMEM182Q6ZP80 229 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 CYP2G1PQ6ZSU1 146 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 DEFB125Q8N687 156 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 BPIFCQ8NFQ6 507 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 TUBA4BQ9H853 241 aa15.84■□□□□ 0.13
TSPAN4-206ENST00000397408 A8MZ25 164 aa15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 CFDP00746 253 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 FCN2Q15485 313 aa15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 TEPPQ6URK8 271 aa15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 C16orf54Q6UWD8 224 aa15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 ASCL2Q99929 193 aa15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 C19orf73Q9NVV2 129 aa15.83■□□□□ 0.12
TSPAN4-206ENST00000397408 MPC2O95563 127 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 PET100P0DJ07 73 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 NUP62P37198 522 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 PAFAH1B2P68402 229 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 HBG1P69891 147 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 HBG2P69892 147 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 GLMPQ8WWB7 406 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 MS4A6AQ9H2W1 248 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 SRD5A3Q9H8P0 318 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 UBQLN2Q9UHD9 624 aa15.82■□□□□ 0.12
TSPAN4-206ENST00000397408 BUB3O43684 328 aa15.81■□□□□ 0.12
TSPAN4-206ENST00000397408 ODF3L2Q3SX64 289 aa15.81■□□□□ 0.12
TSPAN4-206ENST00000397408 WFDC3Q8IUB2 231 aa15.81■□□□□ 0.12
TSPAN4-206ENST00000397408 OR11H7Q8NGC8 314 aa15.81■□□□□ 0.12
TSPAN4-206ENST00000397408 UQCC1Q9NVA1 299 aa15.81■□□□□ 0.12
TSPAN4-206ENST00000397408 PFDN2Q9UHV9 154 aa15.81■□□□□ 0.12
TSPAN4-206ENST00000397408 DNASE2O00115 360 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 S100A11P31949 105 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 SELENOTP62341 195 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 EWSR1Q01844 656 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■■□ 25.6
TSPAN4-206ENST00000397408 STPG3Q8N7X2 389 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 STXBP6Q8NFX7 210 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 PPP1R14BQ96C90 147 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 TMEM147Q9BVK8 224 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 SLC25A31Q9H0C2 315 aa15.8■□□□□ 0.12
TSPAN4-206ENST00000397408 UBE2L5PA0A1B0GUS4 154 aa15.79■□□□□ 0.12
TSPAN4-206ENST00000397408 HELTA6NFD8 242 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms