RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 TMEM144Q7Z5S9 345 aa14.34□□□□□ -0.11
MCF2L-208ENST00000397030 BUB1B-PAK6H3BSN5 160 aa14.34□□□□□ -0.11
MCF2L-208ENST00000397030 APC2O95996 2303 aa14.34□□□□□ -0.11
MCF2L-208ENST00000397030 SSBP2P81877 361 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-208ENST00000397030 RTBDNQ9BSG5 229 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-208ENST00000397030 NCR2O95944 276 aa14.34□□□□□ -0.11
MCF2L-208ENST00000397030 ZNF625Q96I27 306 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-208ENST00000397030 COL4A1P02462 1669 aa14.34□□□□□ -0.11
MCF2L-208ENST00000397030 OVOL3O00110 214 aa14.34□□□□□ -0.11
MCF2L-208ENST00000397030 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.11
MCF2L-208ENST00000397030 RPUSD1Q9UJJ7 312 aaKnown RBP14.33□□□□□ -0.11
MCF2L-208ENST00000397030 TRAV8-2A0A0B4J237 113 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 IGLV3-12A0A075B6K2 115 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 PUSL1Q8N0Z8 303 aaKnown RBP14.33□□□□□ -0.12
MCF2L-208ENST00000397030 NPDC1Q9NQX5 325 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-208ENST00000397030 TRBV6-7A0A0A0MS04 114 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 KNCNA6PVL3 124 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 CD177Q8N6Q3 437 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 Q8TAT8 98 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 NABP1Q96AH0 204 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 ADAMTS7Q9UKP4 1686 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 SNRNP200O75643 2136 aaKnown RBP14.33□□□□□ -0.12
MCF2L-208ENST00000397030 ARFGEF1Q9Y6D6 1849 aa14.33□□□□□ -0.12
MCF2L-208ENST00000397030 COL5A3P25940 1745 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-208ENST00000397030 A0A1B0GW15 77 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 M0R1W7 72 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 PSG1P11464 419 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 THADAQ6YHU6 1953 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 E7EQL1 145 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 TNFRSF14Q92956 283 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 ANAPC10Q9UM13 185 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 ZFC3H1O60293 1989 aaKnown RBP14.32□□□□□ -0.12
MCF2L-208ENST00000397030 PAX9P55771 341 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 PRDM13Q9H4Q3 707 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 ICE1Q9Y2F5 2266 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 DUTP33316 252 aaKnown RBP14.32□□□□□ -0.12
MCF2L-208ENST00000397030 CTAG1AP78358 180 aa14.32□□□□□ -0.12
MCF2L-208ENST00000397030 MORN3Q6PF18 240 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-208ENST00000397030 RBM38Q9H0Z9 239 aaKnown RBP14.32□□□□□ -0.12
MCF2L-208ENST00000397030 M0R2P5 195 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 FAM223BA6NKX1 122 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 FAM223AQ8IWN6 122 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE1Q13065 139 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE4Q13068 117 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE5Q13069 117 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE13Q4V321 117 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GGNQ86UU5 652 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 F8VVB4 439 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 F8VWA3 439 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 APOC4P55056 127 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 UCP1P25874 307 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 PLNP26678 52 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 FOXL1Q12952 345 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 TEX43Q6ZNM6 134 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 GAFA1Q96PS6 74 aa14.31□□□□□ -0.12
MCF2L-208ENST00000397030 PATJQ8NI35 1801 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 TCRAP04437 139 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 PARP14Q460N5 1801 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 TNFSF13O75888 250 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 CKAP5Q14008 2032 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 DPM2O94777 84 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 USMG5Q96IX5 58 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 HIST1H4AP62805 103 aaKnown RBP14.3□□□□□ -0.12
MCF2L-208ENST00000397030 ORMDL2Q53FV1 153 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 C5orf64Q2M2E5 130 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 Q5BKY6 102 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 SUMO4Q6EEV6 95 aa14.3□□□□□ -0.12
MCF2L-208ENST00000397030 CD5P06127 495 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 PGPEP1LA6NFU8 196 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 TMEM126AQ9H061 195 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 RBBP6Q7Z6E9 1792 aaKnown RBP14.29□□□□□ -0.12
MCF2L-208ENST00000397030 NRN1Q9NPD7 142 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 KLK9Q9UKQ9 250 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 MAP1BP46821 2468 aaKnown RBP14.29□□□□□ -0.12
MCF2L-208ENST00000397030 DKK1O94907 266 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 NKAPP1Q8N9T2 125 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 NHP2Q9NX24 153 aaKnown RBP14.29□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE12BA1L429 117 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE7O76087 117 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE12FP0CL80 117 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE12GP0CL81 117 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 GAGE12IP0CL82 117 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 LRRC37AA6NMS7 1700 aa14.29□□□□□ -0.12
MCF2L-208ENST00000397030 C22orf46C9J442 243 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 TUBGCP6Q96RT7 1819 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 SIPA1L3O60292 1781 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-208ENST00000397030 NDUFS8O00217 210 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 ABCA7Q8IZY2 2146 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 STAG3L3P0CL85 134 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 C18orf12Q96KH6 178 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 IGKCP01834 107 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 CHD5Q8TDI0 1954 aa14.28□□□□□ -0.12
MCF2L-208ENST00000397030 TRAV9-2A0A087WT02 112 aa14.27□□□□□ -0.12
MCF2L-208ENST00000397030 A0A1B0GTI1 187 aa14.27□□□□□ -0.12
MCF2L-208ENST00000397030 LAGE3Q14657 143 aa14.27□□□□□ -0.12
MCF2L-208ENST00000397030 ZNF114Q8NC26 417 aa14.27□□□□□ -0.12
MCF2L-208ENST00000397030 C14orf178Q8N769 122 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-208ENST00000397030 ANKRD36A6QL64 1941 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms