RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 PTTG1IPP53801 180 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 MRPS16Q9Y3D3 137 aaKnown RBP11.17□□□□□ -0.62
NUP98-204ENST00000397004 CACNA1HO95180 2353 aa11.17□□□□□ -0.62
NUP98-204ENST00000397004 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 SARAFQ96BY9 339 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 COX7A2P2O60397 106 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 HSBP1O75506 76 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 COX19Q49B96 90 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 TOMM40O96008 361 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 TMEM177Q53S58 311 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 TIMM23BQ5SRD1 257 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 EPDR1Q9UM22 224 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 KLF12Q9Y4X4 402 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 RASL11AQ6T310 242 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 LYPD2Q6UXB3 125 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 MUC15Q8N387 334 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 ORAOV1Q8WV07 137 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
NUP98-204ENST00000397004 IGHV1-24A0A0C4DH33 117 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 UBE2G1P62253 170 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 THAP8Q8NA92 274 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
NUP98-204ENST00000397004 RPH3ALQ9UNE2 315 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 PCNX1Q96RV3 2341 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 ANKRD11Q6UB99 2663 aaPredicted RBP11.15□□□□□ -0.62
NUP98-204ENST00000397004 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 INS-IGF2F8WCM5 200 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 FAM87AP0C7U9 286 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 ORM2P19652 201 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 HCP5Q6MZN7 132 aa11.15□□□□□ -0.62
NUP98-204ENST00000397004 CNTFRP26992 372 aa11.15□□□□□ -0.63
NUP98-204ENST00000397004 TTC28Q96AY4 2481 aa11.15□□□□□ -0.63
NUP98-204ENST00000397004 PGPA6NDG6 321 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 K7EM74 188 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 CA7P43166 264 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 LINC00312Q9Y6C7 94 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
NUP98-204ENST00000397004 PCP4P48539 62 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 SAP30LQ9HAJ7 183 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 PIEZO2Q9H5I5 2752 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 IGHV3-72A0A0B4J1Y9 119 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 TM4SF5O14894 197 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
NUP98-204ENST00000397004 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
NUP98-204ENST00000397004 PGLYRP4Q96LB8 373 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 ZNF835Q9Y2P0 537 aa11.14□□□□□ -0.63
NUP98-204ENST00000397004 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 GP9P14770 177 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 DEFB124Q8NES8 71 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 TRAV17A0A0B4J275 112 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 SLC25A17O43808 307 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
NUP98-204ENST00000397004 ZNF137PP52743 207 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 ERHP84090 104 aaKnown RBP11.13□□□□□ -0.63
NUP98-204ENST00000397004 MPV17L2Q567V2 206 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 OR1B1Q8NGR6 318 aa11.13□□□□□ -0.63
NUP98-204ENST00000397004 C20orf202A1L168 122 aa11.12□□□□□ -0.63
NUP98-204ENST00000397004 LTAP01374 205 aa11.12□□□□□ -0.63
NUP98-204ENST00000397004 CRYGCP07315 174 aa11.12□□□□□ -0.63
NUP98-204ENST00000397004 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
NUP98-204ENST00000397004 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
NUP98-204ENST00000397004 SLC25A5P05141 298 aaKnown RBP11.12□□□□□ -0.63
NUP98-204ENST00000397004 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
NUP98-204ENST00000397004 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
NUP98-204ENST00000397004 KLHDC1Q8N7A1 406 aa11.12□□□□□ -0.63
NUP98-204ENST00000397004 SPAARA0A1B0GVQ0 90 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 DEFB109BQ30KR1 87 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 GPR82Q96P67 336 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 PMCHL2Q9BQD1 86 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 hADV38S2A0JD32 116 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
NUP98-204ENST00000397004 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 CD40P25942 277 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 ZC2HC1AQ96GY0 325 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 RPP21Q9H633 154 aaKnown RBP11.11□□□□□ -0.63
NUP98-204ENST00000397004 MALRD1Q5VYJ5 2156 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 CUL9Q8IWT3 2517 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 IGHV1-69-2A0A0G2JMI3 117 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 SYS1-DBNDD2H3BUS1 97 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 HIST1H1EP10412 219 aaKnown RBP11.11□□□□□ -0.63
NUP98-204ENST00000397004 RPL19P84098 196 aaKnown RBP11.11□□□□□ -0.63
NUP98-204ENST00000397004 OR4C13Q8NGP0 309 aa11.11□□□□□ -0.63
NUP98-204ENST00000397004 TMEM70Q9BUB7 260 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms