RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MPDU1O75352 247 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 SCGB2A1O75556 95 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 BRI3O95415 125 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 MT-CO2P00403 227 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 TRBV12-3P01733 135 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 GAMTQ14353 236 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 TEPPQ6URK8 271 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 C19orf35Q6ZS72 473 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 FAM223AQ8IWN6 122 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 BAP18Q8IXM2 172 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 NECAP1Q8NC96 275 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 STOML3Q8TAV4 291 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 ST8SIA2Q92186 375 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 GNPNAT1Q96EK6 184 aaPredicted RBP7.85□□□□□ -1.15
NEDD8-202ENST00000396828 ACY3Q96HD9 319 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 CXorf58Q96LI9 332 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 PARD6GQ9BYG4 376 aaPredicted RBP7.85□□□□□ -1.15
NEDD8-202ENST00000396828 ZMAT4Q9H898 229 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 FBXL7Q9UJT9 491 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 DMRT1Q9Y5R6 373 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 TRBV9A0A0B4J1U6 114 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 LCE6AA0A183 80 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 IZUMO1RA6ND01 250 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 C17orf112F2Z3M2 114 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 I3L2K1 104 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 OR2J3O76001 311 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 FGF7P21781 194 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 RHOGP84095 191 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 ATP5G2Q06055 141 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-202ENST00000396828 KLK9Q2XQG4 91 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 BTNL8Q6UX41 500 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 ADAMTSL5Q6ZMM2 481 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 TMEM144Q7Z5S9 345 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 ZNF709Q8N972 641 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 HSD17B11Q8NBQ5 300 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 VN1R17PQ8TDU5 208 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 PHYHIPLQ96FC7 376 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 FANCD2OSQ96PS1 177 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 WDR61Q9GZS3 305 aaKnown RBP7.84□□□□□ -1.15
NEDD8-202ENST00000396828 FNDC4Q9H6D8 234 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-202ENST00000396828 KCNIP2Q9NS61 270 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 KLK9Q9UKQ9 250 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 WDR83OSQ9Y284 106 aa7.84□□□□□ -1.15
NEDD8-202ENST00000396828 FRAS1Q86XX4 4008 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 IGHV3-21A0A0B4J1V1 117 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 A0A0G2JLM5 398 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 A8MZ25 164 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 K7EIM0 57 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 NDUFB8O95169 186 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 IFNA7P01567 189 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 NPBWR1P48145 328 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 RND2P52198 227 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 SYNJ2BPP57105 145 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 MLANAQ16655 118 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 HAGHQ16775 308 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 C15orf32Q32M92 178 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 TMEM116Q8NCL8 245 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 OR4X1Q8NH49 305 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 SCARB1Q8WTV0 552 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 NPIPB3Q92617 1050 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 EEF1AKMT3Q96AZ1 226 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 USMG5Q96IX5 58 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 TXN2Q99757 166 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 GINS3Q9BRX5 216 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 NPCDR1Q9BY65 106 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 ARV1Q9H2C2 271 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 C21orf62Q9NYP8 219 aa7.83□□□□□ -1.16
NEDD8-202ENST00000396828 TRAV30A0A087WSZ9 112 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 TRBV7-1A0A0A6YYK4 115 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 ZFP92A6NM28 416 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 GNG7O60262 68 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 IGHV3-48P01763 117 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 FABP1P07148 127 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 CSN3P07498 182 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 SEC11BP0C7V7 166 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 ATP6V0CP27449 155 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 CAMLGP49069 296 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 MFAP4P55083 255 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 Q56UQ5 140 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 OR9G4Q8NGQ1 327 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 PSMG3Q9BT73 122 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-202ENST00000396828 ELOVL1Q9BW60 279 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 RETNQ9HD89 108 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 TIMM9Q9Y5J7 89 aa7.82□□□□□ -1.16
NEDD8-202ENST00000396828 MFSD2BA6NFX1 497 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 AGPAT2O15120 278 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 CLN5O75503 358 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 SPP1P10451 314 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 EDN2P20800 178 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 OR10J1P30954 320 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 FCGR2BP31994 310 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-202ENST00000396828 FAM209BQ5JX69 171 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 ZNF343Q6P1L6 599 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 OR2G3Q8NGZ4 309 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 TMED6Q8WW62 240 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 ATP6V0BQ99437 205 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms