RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FDCSPQ8NFU4 85 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 DNAJC30Q96LL9 226 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 GTSF1LQ9H1H1 148 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 PAX4O43316 350 aa11.65□□□□□ -0.55
COL4A3-202ENST00000396578 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.55
COL4A3-202ENST00000396578 CTSBP07858 339 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 PSG7Q13046 419 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 VWC2LB2RUY7 222 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 PLEKHB2Q96CS7 222 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 LINC00271P0C7V0 271 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 FAM201AQ5SY85 155 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 CCL1P22362 96 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 C1orf194Q5T5A4 169 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 TPTE2P1Q5T6R2 138 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 SPANXA1Q9NS26 97 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 BTCP35070 178 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 GUSBP1Q15486 140 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 PCNX2A6NKB5 2137 aa11.64□□□□□ -0.55
COL4A3-202ENST00000396578 TMEM8BA6NDV4 472 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 D6R8Y8 96 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 OVOL1O14753 267 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 LEPROTO15243 131 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 C7orf69Q9H7B7 122 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 A0A0G2JMZ2 1700 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 LRRC37A2A6NM11 1700 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 LRRC37AA6NMS7 1700 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 TRBV24-1A0A075B6N3 115 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 RFPL3SP0C7P2 107 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 RHOGP84095 191 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 PRADC1Q9BSG0 188 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 PRCDQ00LT1 54 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 DLEU1O43261 78 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 ACTL10Q5JWF8 245 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 SPSB2Q99619 263 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 ATP1A1-AS1Q5TC04 95 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 C19orf48Q6RUI8 117 aa11.63□□□□□ -0.55
COL4A3-202ENST00000396578 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 IGKV1D-43A0A0B4J1Z2 117 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 A0A087X0K7 114 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 TMEM133Q9H2Q1 129 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 EP300Q09472 2414 aaPredicted RBP11.62□□□□□ -0.55
COL4A3-202ENST00000396578 CXCL1P09341 107 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 ABHD17AQ96GS6 310 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 IGKV1D-13A0A0B4J2D9 117 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 FGF16O43320 207 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 IGKV1-13P0DP09 117 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 MESP2Q0VG99 397 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 SIGLEC12Q96PQ1 595 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 CD5P06127 495 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 IGHV1-2P23083 117 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 PAX8Q06710 450 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
COL4A3-202ENST00000396578 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
COL4A3-202ENST00000396578 UBE2V1Q13404 147 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 LY6G6FQ5SQ64 297 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 TEX43Q6ZNM6 134 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 MRPL52Q86TS9 123 aaKnown RBP11.61□□□□□ -0.55
COL4A3-202ENST00000396578 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 TIAF1O95411 115 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 CELA3BP08861 270 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 DYSFO75923 2080 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 SHANK1Q9Y566 2161 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
COL4A3-202ENST00000396578 SSC4DQ8WTU2 575 aa11.61□□□□□ -0.55
COL4A3-202ENST00000396578 KLF17Q5JT82 389 aaPredicted RBP11.61□□□□□ -0.55
COL4A3-202ENST00000396578 CEACAM1P13688 526 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 MAJINQ3KP22 176 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 ASCL4Q6XD76 172 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 PPP1R32Q7Z5V6 425 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 A0A1B0GW64 132 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 hDV102S1A0JD36 115 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 F8WEM9 126 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 PRSS22Q9GZN4 317 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 KLF12Q9Y4X4 402 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 GTF3AQ92664 365 aaKnown RBP11.6□□□□□ -0.55
COL4A3-202ENST00000396578 OR9G9P0C7N8 305 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 SRD5A1P18405 259 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 C1orf122Q6ZSJ8 110 aa11.6□□□□□ -0.55
COL4A3-202ENST00000396578 MRPS18CQ9Y3D5 142 aaKnown RBP11.6□□□□□ -0.55
COL4A3-202ENST00000396578 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
COL4A3-202ENST00000396578 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
COL4A3-202ENST00000396578 MPZP25189 248 aa11.59□□□□□ -0.55
COL4A3-202ENST00000396578 DMRTC2Q8IXT2 367 aaPredicted RBP11.59□□□□□ -0.55
COL4A3-202ENST00000396578 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
COL4A3-202ENST00000396578 DUTP33316 252 aaKnown RBP11.59□□□□□ -0.55
COL4A3-202ENST00000396578 NAA38Q9BRA0 125 aaKnown RBP11.59□□□□□ -0.55
COL4A3-202ENST00000396578 COLCA2A8K830 154 aa11.59□□□□□ -0.55
COL4A3-202ENST00000396578 CELA3AP09093 270 aa11.59□□□□□ -0.55
COL4A3-202ENST00000396578 CCL3L1P16619 93 aa11.59□□□□□ -0.55
COL4A3-202ENST00000396578 RASL10AQ92737 203 aa11.59□□□□□ -0.55
COL4A3-202ENST00000396578 SLC25A28Q96A46 364 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms