RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 SPATA31B1PQ5VZV4 182 aa12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 PRSS54Q6PEW0 395 aa12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 FABP12A6NFH5 140 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 A6NHS1 94 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 UCP1P25874 307 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 TNFSF8P32971 234 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 RND2P52198 227 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 SIGLEC15Q6ZMC9 328 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 HEYLQ9NQ87 328 aaPredicted RBP12.51□□□□□ -0.41
EXOSC3-202ENST00000396521 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 IL4P05112 153 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 RD3LP0DJH9 198 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 ID1P41134 155 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 Q6ZRM9 215 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 ABHD1Q96SE0 405 aa12.5□□□□□ -0.41
EXOSC3-202ENST00000396521 GABARAPH6UMI1 98 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 M0QYG6 137 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 TOMM40O96008 361 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 PI3P19957 117 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 TERB2Q8NHR7 220 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 SMIM4Q8WVI0 70 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
EXOSC3-202ENST00000396521 CDS2O95674 445 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 EMP1P54849 157 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 PYDC2Q56P42 97 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 SAMD13Q5VXD3 122 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 SLC24A4Q8NFF2 622 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 GOLT1BQ9Y3E0 138 aa12.48□□□□□ -0.41
EXOSC3-202ENST00000396521 IGLV2-18A0A075B6J9 118 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 CTDSPLO15194 276 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 SSBP1Q04837 148 aaKnown RBP12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 SP6Q3SY56 376 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 OR8G2PQ6IF36 304 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 SAV1Q9H4B6 383 aaPredicted RBP12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 PTTG2Q9NZH5 202 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 MTFP1Q9UDX5 166 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 V9GYH0 126 aa12.47□□□□□ -0.41
EXOSC3-202ENST00000396521 HBE1P02100 147 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 PSMB3P49720 205 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 ATP5IP56385 69 aaPredicted RBP12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 TAS2R19P59542 299 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 OR51G1Q8NGK1 321 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 NPIPB3Q92617 1050 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 KLK11Q9UBX7 282 aa12.46□□□□□ -0.41
EXOSC3-202ENST00000396521 PKD1P98161 4303 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 A0A0G2JRQ6 117 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 CDK2AP2O75956 126 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 CD3DP04234 171 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 TMED3Q9Y3Q3 217 aa12.45□□□□□ -0.42
EXOSC3-202ENST00000396521 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 FABP1P07148 127 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 PSG1P11464 419 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 PSG9Q00887 426 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 TMEM229BQ8NBD8 167 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 OR13C8Q8NGS7 320 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 COQ8AQ8NI60 647 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 GLYATL2Q8WU03 294 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 CACNG5Q9UF02 275 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 C14orf166Q9Y224 244 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 U3KQ87 197 aa12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 DYNC1H1Q14204 4646 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-202ENST00000396521 TEX13DA0A0J9YY54 714 aaPredicted RBP12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 INPP1P49441 399 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 PAX9P55771 341 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 KLF9Q13886 244 aaPredicted RBP12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 MEF2DQ14814 521 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 SURF2Q15527 256 aaPredicted RBP12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 ZNF79Q15937 498 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 TRIQKQ629K1 86 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 ZNF575Q86XF7 245 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 ZNF709Q8N972 641 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 LINC00052Q96N35 136 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
EXOSC3-202ENST00000396521 ISLRO14498 428 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 RAB3DO95716 219 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 IGKV3-20P01619 116 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
EXOSC3-202ENST00000396521 AP3S2P59780 193 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms