RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ITLN2Q8WWU7 325 aaPredicted RBP13.31□□□□□ -0.28
NUP50-202ENST00000396096 TMEM18Q96B42 140 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 SMIM12Q96EX1 92 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 LINC00479Q96M42 142 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 MRPL18Q9H0U6 180 aaKnown RBP13.31□□□□□ -0.28
NUP50-202ENST00000396096 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 GSX1Q9H4S2 264 aaPredicted RBP13.31□□□□□ -0.28
NUP50-202ENST00000396096 TMEM14CQ9P0S9 112 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 HRNRQ86YZ3 2850 aaPredicted RBP13.31□□□□□ -0.28
NUP50-202ENST00000396096 FXYD3Q14802 87 aa13.3□□□□□ -0.28
NUP50-202ENST00000396096 Q8N6K4 173 aa13.3□□□□□ -0.28
NUP50-202ENST00000396096 RASL11BQ9BPW5 248 aa13.3□□□□□ -0.28
NUP50-202ENST00000396096 NBASA2RRP1 2371 aa13.3□□□□□ -0.28
NUP50-202ENST00000396096 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 MT-ND6P03923 174 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 HOXB4P17483 251 aaPredicted RBP13.29□□□□□ -0.28
NUP50-202ENST00000396096 ZFP36P26651 326 aaKnown RBP13.29□□□□□ -0.28
NUP50-202ENST00000396096 CDKN1AP38936 164 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 RANP62826 216 aaKnown RBP13.29□□□□□ -0.28
NUP50-202ENST00000396096 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 UNQ6494/PRO21346Q6UXR6 183 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 BAGE2Q86Y30 109 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 TMEM190Q8WZ59 177 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 MBD6Q96DN6 1003 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 SIRPDQ9H106 197 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 MRPL27Q9P0M9 148 aaKnown RBP13.29□□□□□ -0.28
NUP50-202ENST00000396096 EFNA4P52798 201 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 C7orf69Q9H7B7 122 aa13.29□□□□□ -0.28
NUP50-202ENST00000396096 HIVEP3Q5T1R4 2406 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 PGPA6NDG6 321 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 NPIPB5A8MRT5 1133 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
NUP50-202ENST00000396096 IER3P46695 156 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 LYZP61626 148 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 FBLN7Q53RD9 439 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 BLNKQ8WV28 456 aa13.28□□□□□ -0.28
NUP50-202ENST00000396096 SLC25A39Q9BZJ4 359 aaPredicted RBP13.28□□□□□ -0.28
NUP50-202ENST00000396096 COL6A6A6NMZ7 2263 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 ZNF705GA8MUZ8 300 aaPredicted RBP13.27□□□□□ -0.28
NUP50-202ENST00000396096 RD3LP0DJH9 198 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 GZMBP10144 247 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 GNG5P63218 68 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 HES1Q14469 280 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 ZNF600Q6ZNG1 722 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 ZNF48Q96MX3 618 aaPredicted RBP13.27□□□□□ -0.28
NUP50-202ENST00000396096 ATG101Q9BSB4 218 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 CHRDL1Q9BU40 450 aa13.27□□□□□ -0.28
NUP50-202ENST00000396096 TRAV34A0A0B4J273 112 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 IZUMO1RA6ND01 250 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 SNURFLB1AK76 121 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 NDUFS7O75251 213 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 ESDP10768 282 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 NHLRC2Q8NBF2 726 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 UBTD1Q9HAC8 227 aa13.27□□□□□ -0.29
NUP50-202ENST00000396096 A0A1W2PRD5 423 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 A0A1W2PRF3 423 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 A0A1W2PRM7 423 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 TOMM40O96008 361 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 HIST1H1EP10412 219 aaKnown RBP13.26□□□□□ -0.29
NUP50-202ENST00000396096 CD24P25063 80 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 UBE2G1P62253 170 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 ASPHD1Q5U4P2 390 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 TMEM136Q6ZRR5 245 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 TMEM256Q8N2U0 113 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 GRAMD2BQ96HH9 432 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 FMC1Q96HJ9 113 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 TMEM68Q96MH6 324 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 RBM14Q96PK6 669 aaKnown RBP13.26□□□□□ -0.29
NUP50-202ENST00000396096 Q9H3A6 140 aa13.26□□□□□ -0.29
NUP50-202ENST00000396096 TBL2Q9Y4P3 447 aaKnown RBP13.26□□□□□ -0.29
NUP50-202ENST00000396096 LRBAP50851 2863 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 IGLV11-55A0A075B6I3 123 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 IGHV2-70DA0A0C4DH43 119 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 GATCO43716 136 aaKnown RBP13.25□□□□□ -0.29
NUP50-202ENST00000396096 AMY1AP04745 511 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 Q0VG73 95 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 IGFBPL1Q8WX77 278 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 ARPC1AQ92747 370 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 GPR82Q96P67 336 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 SHANK2-AS3Q9BTD1 123 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 FAM103A1Q9BTL3 118 aaKnown RBP13.25□□□□□ -0.29
NUP50-202ENST00000396096 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 SERTAD4Q9NUC0 356 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 DCHS2Q6V1P9 2916 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 H3BRN7 92 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 SNRPCP09234 159 aaKnown RBP13.25□□□□□ -0.29
NUP50-202ENST00000396096 CRISP2P16562 243 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 RASL11AQ6T310 242 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 WIPF2Q8TF74 440 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms