RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 NOXA1Q86UR1 476 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 SELENOHQ8IZQ5 122 aaKnown RBP4.51□□□□□ -1.69
PTPN20-208ENST00000395727 OR51S1Q8NGJ8 323 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 GATAD1Q8WUU5 269 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 TRIM63Q969Q1 353 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 PINX1Q96BK5 328 aaKnown RBP4.51□□□□□ -1.69
PTPN20-208ENST00000395727 RNF183Q96D59 192 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 GRAMD2BQ96HH9 432 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 FNDC4Q9H6D8 234 aaPredicted RBP4.51□□□□□ -1.69
PTPN20-208ENST00000395727 MAP6D1Q9H9H5 199 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 ENY2Q9NPA8 101 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 SCP2D1Q9UJQ7 156 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 KCNIP3Q9Y2W7 256 aa4.51□□□□□ -1.69
PTPN20-208ENST00000395727 PUS1Q9Y606 427 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTPN20-208ENST00000395727 A0A0B4J2A0 478 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 A0A1B0GU03 582 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 ZNF701M0R085 212 aaPredicted RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 ZNF207O43670 478 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 NOL3O60936 208 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 YIF1AO95070 293 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 IGLC1P0CG04 106 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SULT1A3P0DMM9 295 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SULT1A4P0DMN0 295 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SLC25A6P12236 298 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TNFSF8P32971 234 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 FAUP35544 74 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 OPRK1P41145 380 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 ETV6P41212 452 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 CCR6P51684 374 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 AP3S2P59780 193 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 YPEL3P61236 119 aaPredicted RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SUPT4H1P63272 117 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TMEM41BQ5BJD5 291 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TMEM128Q5BJH2 165 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TMEM268Q5VZI3 342 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 ETFRF1Q6IPR1 90 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TCF24Q7RTU0 167 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TMEM217Q8N7C4 229 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 LRTM2Q8N967 370 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SLC24A4Q8NFF2 622 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 OR1S2Q8NGQ3 325 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 RNASE11Q8TAA1 199 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 TMEM230Q96A57 120 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 C11orf68Q9H3H3 251 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SEPSECSQ9HD40 501 aaKnown RBP4.5□□□□□ -1.69
PTPN20-208ENST00000395727 HSPB7Q9UBY9 170 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 CACNG5Q9UF02 275 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 SHPKQ9UHJ6 478 aa4.5□□□□□ -1.69
PTPN20-208ENST00000395727 IGHV3OR16-8A0A075B7F1 116 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 NUPR2A6NF83 97 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 FABP12A6NFH5 140 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 MPTX1A8MV57 137 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 FAM90A26D6RGX4 464 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 K7EQG2 157 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 MBPP02686 304 aaPredicted RBP4.49□□□□□ -1.69
PTPN20-208ENST00000395727 ANXA3P12429 323 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 NPPCP23582 126 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 NPY1RP25929 384 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 EIF2B2P49770 351 aaKnown RBP4.49□□□□□ -1.69
PTPN20-208ENST00000395727 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
PTPN20-208ENST00000395727 SMCO1Q147U7 214 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 DEFB135Q30KP9 77 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 C4orf46Q504U0 113 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 SPINK9Q5DT21 86 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 PRSS54Q6PEW0 395 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 LYG2Q86SG7 212 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 MCFD2Q8NI22 146 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 TMEM170AQ8WVE7 144 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 GPR146Q96CH1 333 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 METTL26Q96S19 204 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 SLC25A21Q9BQT8 299 aaPredicted RBP4.49□□□□□ -1.69
PTPN20-208ENST00000395727 RBM38Q9H0Z9 239 aaKnown RBP4.49□□□□□ -1.69
PTPN20-208ENST00000395727 CSTL1Q9H114 145 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 MS4A6AQ9H2W1 248 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 MRPL36Q9P0J6 103 aaKnown RBP4.49□□□□□ -1.69
PTPN20-208ENST00000395727 UBQLN2Q9UHD9 624 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 U3KQ87 197 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 V9GYH0 126 aa4.49□□□□□ -1.69
PTPN20-208ENST00000395727 A0A0J9YWU9 116 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 HELTA6NFD8 242 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 PITX3O75364 302 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 TOMM40O96008 361 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 IGHV3-48P01763 117 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 APOHP02749 345 aaPredicted RBP4.48□□□□□ -1.69
PTPN20-208ENST00000395727 NUP62P37198 522 aaPredicted RBP4.48□□□□□ -1.69
PTPN20-208ENST00000395727 P2RY1P47900 373 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 RND2P52198 227 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 AP2S1P53680 142 aaPredicted RBP4.48□□□□□ -1.69
PTPN20-208ENST00000395727 UBE2MP61081 183 aaKnown RBP4.48□□□□□ -1.69
PTPN20-208ENST00000395727 ZNF79Q15937 498 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 MORN3Q6PF18 240 aaPredicted RBP4.48□□□□□ -1.69
PTPN20-208ENST00000395727 CCDC190Q86UF4 302 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 APRG1Q8IVJ8 170 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 LGI3Q8N145 548 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 DTD1Q8TEA8 209 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 DCANP1Q8TF63 244 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 Q8WTZ3 238 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 GLMPQ8WWB7 406 aa4.48□□□□□ -1.69
PTPN20-208ENST00000395727 NARS2Q96I59 477 aaKnown RBP4.48□□□□□ -1.69
PTPN20-208ENST00000395727 WDR12Q9GZL7 423 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms