RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 TRIM63Q969Q1 353 aa9.85□□□□□ -0.83
SCAF11-203ENST00000395453 RBKSQ9H477 322 aa9.85□□□□□ -0.83
SCAF11-203ENST00000395453 HELTA6NFD8 242 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 NOL3O60936 208 aaKnown RBP9.84□□□□□ -0.83
SCAF11-203ENST00000395453 PITX3O75364 302 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 TOMM40O96008 361 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 IFNA10P01566 189 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 ZNF688P0C7X2 276 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 RD3LP0DJH9 198 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 EIF2B2P49770 351 aaKnown RBP9.84□□□□□ -0.83
SCAF11-203ENST00000395453 AP2S1P53680 142 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-203ENST00000395453 SRPXP78539 464 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 USF2Q15853 346 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-203ENST00000395453 DTD1Q8TEA8 209 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 MUC4Q99102 2169 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 VPS13DQ5THJ4 4388 aa9.84□□□□□ -0.83
SCAF11-203ENST00000395453 PIGBOS1A0A0B4J2F0 54 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 BUB3O43684 328 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 IL4P05112 153 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 SPP1P10451 314 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 PSG1P11464 419 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 ANXA3P12429 323 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 TMEM41BQ5BJD5 291 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
SCAF11-203ENST00000395453 C11orf45Q8TAV5 145 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 ACY3Q96HD9 319 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 SEPSECSQ9HD40 501 aaKnown RBP9.83□□□□□ -0.84
SCAF11-203ENST00000395453 V9GYH0 126 aa9.83□□□□□ -0.84
SCAF11-203ENST00000395453 DUXBA0A1W2PPF3 345 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 KNCNA6PVL3 124 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 FAUP35544 74 aaKnown RBP9.82□□□□□ -0.84
SCAF11-203ENST00000395453 GPX4P36969 197 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-203ENST00000395453 AP3S2P59780 193 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 NANOS2P60321 138 aaKnown RBP9.82□□□□□ -0.84
SCAF11-203ENST00000395453 TNP2Q05952 138 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 DHRS2Q13268 280 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 GAMTQ14353 236 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 ZNF79Q15937 498 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 LRTM2Q8N967 370 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 Q8NAQ8 132 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 DEDD2Q8WXF8 326 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 RAB40CQ96S21 281 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 MFFQ9GZY8 342 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 IGKV1D-37A0A075B6S9 117 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 ZNF705EA8MWA4 302 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-203ENST00000395453 SLC25A6P12236 298 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 PYDC2Q56P42 97 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 TOMM5Q8N4H5 51 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 CSNK1G2-AS1Q8NCQ2 148 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 OR51G1Q8NGK1 321 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 OR1S1Q8NH92 325 aa9.82□□□□□ -0.84
SCAF11-203ENST00000395453 SLC25A21Q9BQT8 299 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-203ENST00000395453 FAM90A26D6RGX4 464 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 DEFB4AO15263 64 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 IFNA4P05014 189 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
SCAF11-203ENST00000395453 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 C4BPBP20851 252 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
SCAF11-203ENST00000395453 ACTL10Q5JWF8 245 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 SIGLEC15Q6ZMC9 328 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 CCDC190Q86UF4 302 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 RNF125Q96EQ8 232 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 HRH4Q9H3N8 390 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
SCAF11-203ENST00000395453 MIFP14174 115 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 ZNF90Q03938 601 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 PSMG4Q5JS54 123 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 OR8G2PQ6IF36 304 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 LINC00336Q6ZUF6 198 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 TMED4Q7Z7H5 227 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 RBM38Q9H0Z9 239 aaKnown RBP9.8□□□□□ -0.84
SCAF11-203ENST00000395453 X6R8D5 127 aa9.8□□□□□ -0.84
SCAF11-203ENST00000395453 IGHV4-28A0A0C4DH34 117 aa9.79□□□□□ -0.84
SCAF11-203ENST00000395453 S100A5P33763 92 aa9.79□□□□□ -0.84
SCAF11-203ENST00000395453 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
SCAF11-203ENST00000395453 FBXL17Q9UF56 701 aa9.79□□□□□ -0.84
SCAF11-203ENST00000395453 TMED3Q9Y3Q3 217 aa9.79□□□□□ -0.84
SCAF11-203ENST00000395453 DNAH6Q9C0G6 4158 aa9.79□□□□□ -0.84
SCAF11-203ENST00000395453 IGKV1OR2-108A0A075B7D4 117 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 ZFP92A6NM28 416 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 H3BMM0 161 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 SFT2D2O95562 160 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 VAMP1P23763 118 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 NUP62P37198 522 aaPredicted RBP9.78□□□□□ -0.84
SCAF11-203ENST00000395453 TCTAP57738 103 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 RAB11AP62491 216 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 C1orf194Q5T5A4 169 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 SLC35E1Q96K37 410 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 TRGV9Q99603 122 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 PFDN2Q9UHV9 154 aa9.78□□□□□ -0.84
SCAF11-203ENST00000395453 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-203ENST00000395453 SNRPGP15A8MWD9 76 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 C11orf94C9JXX5 98 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 PRSS46E5RG02 174 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 ZNF701M0R085 212 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms