RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SS18L1O75177 396 aaPredicted RBP3.3□□□□□ -1.88
HERC4-204ENST00000395198 SEC11BP0C7V7 166 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 POU3F1Q03052 451 aaPredicted RBP3.3□□□□□ -1.88
HERC4-204ENST00000395198 MSMPQ1L6U9 139 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 PAGE3Q5JUK9 113 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 TRNP1Q6NT89 227 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 ZNF880Q6PDB4 577 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 Q8N976 141 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 RALGAPA2Q2PPJ7 1873 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 H0Y9J4 135 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 H0YIZ8 118 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 TNFSF12O43508 249 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 ATP4BP51164 291 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 LSM3P62310 102 aaKnown RBP3.3□□□□□ -1.88
HERC4-204ENST00000395198 SGMS2Q8NHU3 365 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 PATE1Q8WXA2 126 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 ZFHX2Q9C0A1 2572 aaPredicted RBP3.3□□□□□ -1.88
HERC4-204ENST00000395198 ANAPC1Q9H1A4 1944 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 CACNA1AO00555 2505 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 C9orf118A6NHY6 69 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 GFRA3O60609 400 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 TMEM258P61165 79 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 HMGN3Q15651 99 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 C9orf153Q5TBE3 101 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 AAED1Q7RTV5 226 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 VN1R4Q7Z5H5 301 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 OR2T35Q8NGX2 323 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 ZNF236Q9UL36 1845 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 DSPPQ9NZW4 1301 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 C5orf49A4QMS7 147 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 HMSDA8MTL9 139 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 C9JQL5 133 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 TMEM262E9PQX1 116 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 SNRNP200O75643 2136 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 NDUFB6O95139 128 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 SLC25A5P05141 298 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 RBMXP38159 391 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 SPATA45Q537H7 98 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 RUSC1-AS1Q66K80 236 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 AMTNQ6UX39 209 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ABCA7Q8IZY2 2146 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ZFP62Q8NB50 900 aaPredicted RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 OR52P1PQ8NH57 321 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 CACNG5Q9UF02 275 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 KCNE5Q9UJ90 142 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 SELENOKQ9Y6D0 94 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 V9GY05 133 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 BPTFQ12830 3046 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ABCA4P78363 2273 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 POLEQ07864 2286 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 TRBV19A0A075B6N1 114 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 A0A0G2JRQ6 117 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 MUC21A0A140T8X8 626 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 CRYGAP11844 174 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ZNF90Q03938 601 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ERCC8Q13216 396 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.882e-8■■■□□ 15.1
HERC4-204ENST00000395198 MUC21Q5SSG8 566 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 MRPL2Q5T653 305 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 FOXL2NBQ6ZUU3 175 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 C9orf40Q8IXQ3 194 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ZNF709Q8N972 641 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 OR10J6PQ8NGY7 276 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 NABP1Q96AH0 204 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 KCTD12Q96CX2 325 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 TAAR3PQ9P1P4 343 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 CTSZQ9UBR2 303 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 A8MUN3 132 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 FSTL3O95633 263 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 CD55P08174 381 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 ZNF823P16415 610 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 MTPNP58546 118 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 LMO4P61968 165 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 PRR3P79522 188 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 KLF17Q5JT82 389 aaPredicted RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 CEACAM19Q7Z692 300 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 GTSCR1Q86UQ5 136 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 C10orf126Q8N4M7 172 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 RNF126Q9BV68 326 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 MRPL20Q9BYC9 149 aaKnown RBP3.29□□□□□ -1.88
HERC4-204ENST00000395198 PLEKHA3Q9HB20 300 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 OR2W1Q9Y3N9 320 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 CACNA1IQ9P0X4 2223 aa3.29□□□□□ -1.88
HERC4-204ENST00000395198 IGLV3-10A0A075B6K4 115 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 LOC285095A0A1B0GVY8 99 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 TLCD2A6NGC4 264 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 CPSF4LA6NMK7 179 aaKnown RBP3.28□□□□□ -1.88
HERC4-204ENST00000395198 F8W1H4 67 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 CRYGSP22914 178 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 LINC00313P59037 77 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 MPV17L2Q567V2 206 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 HES3Q5TGS1 186 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 C11orf87Q6NUJ2 197 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 MKXQ8IYA7 352 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 C1orf174Q8IYL3 243 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 ZNF721Q8TF20 911 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms