RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TRGV9Q99603 122 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 OR5AC2Q9NZP5 309 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 H0YIZ8 118 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 CXCL3P19876 107 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 NPPCP23582 126 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 CD81P60033 236 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 OXA1LQ15070 435 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 PBDC1Q9BVG4 233 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 VSIRQ9H7M9 311 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 LYRM2Q9NU23 88 aaPredicted RBP14.94□□□□□ -0.02
SNCA-203ENST00000394986 SMAD5-AS1Q9Y6J3 95 aa14.94□□□□□ -0.02
SNCA-203ENST00000394986 IGKV3-7A0A075B6H7 116 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 TRAV25A0A0B4J276 109 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 GATA2P23769 480 aaPredicted RBP14.93□□□□□ -0.02
SNCA-203ENST00000394986 CRYBB3P26998 211 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 TMEM182Q6ZP80 229 aaPredicted RBP14.93□□□□□ -0.02
SNCA-203ENST00000394986 GTSCR1Q86UQ5 136 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 TMEM217Q8N7C4 229 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 PPP1R1CQ8WVI7 109 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 RNF125Q96EQ8 232 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 WFDC10AQ9H1F0 79 aa14.93□□□□□ -0.02
SNCA-203ENST00000394986 TSPAN4O14817 238 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 DFFBO76075 338 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 LYZP61626 148 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 CYCSP99999 105 aaKnown RBP14.92□□□□□ -0.02
SNCA-203ENST00000394986 SLC38A11Q08AI6 406 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 FCN2Q15485 313 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 LAMTOR1Q6IAA8 161 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 TCF24Q7RTU0 167 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 TMEM144Q7Z5S9 345 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 TMEM252Q8N6L7 170 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 NEURL2Q9BR09 285 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 HNRNPCP07910 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNCA-203ENST00000394986 OR11H7Q8NGC8 314 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 MED28Q9H204 178 aa14.92□□□□□ -0.02
SNCA-203ENST00000394986 FABP1P07148 127 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 IGHV4-30-4P0DP06 118 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 P2RY1P47900 373 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 TFPI2P48307 235 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 FAM90A2PQ658T7 463 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 GBGT1Q8N5D6 347 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 SPAG8Q99932 426 aaPredicted RBP14.91□□□□□ -0.02
SNCA-203ENST00000394986 RABAC1Q9UI14 185 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 U3KQE9 123 aa14.91□□□□□ -0.02
SNCA-203ENST00000394986 RLN2P04090 185 aa14.9□□□□□ -0.02
SNCA-203ENST00000394986 BMI1P35226 326 aa14.9□□□□□ -0.02
SNCA-203ENST00000394986 SULT1A1P50225 295 aa14.9□□□□□ -0.02
SNCA-203ENST00000394986 DEFB125Q8N687 156 aa14.9□□□□□ -0.02
SNCA-203ENST00000394986 NARS2Q96I59 477 aaKnown RBP14.9□□□□□ -0.02
SNCA-203ENST00000394986 A0A1W2PS18 150 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 E5RGE8 158 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 FNDC10F2Z333 226 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 MPC2O95563 127 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 CYP2G1PQ6ZSU1 146 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 STX12Q86Y82 276 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 STPG3Q8N7X2 389 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 RNF126Q9BV68 326 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 GGACTQ9BVM4 153 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 TMEM231Q9H6L2 316 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 NPVFQ9HCQ7 196 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 UBQLN2Q9UHD9 624 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 TGP01266 2768 aa14.89□□□□□ -0.03
SNCA-203ENST00000394986 FRMD6-AS1P0C7T7 363 aa14.88□□□□□ -0.03
SNCA-203ENST00000394986 EIF2B2P49770 351 aaKnown RBP14.88□□□□□ -0.03
SNCA-203ENST00000394986 RPL11P62913 178 aaKnown RBP14.88□□□□□ -0.03
SNCA-203ENST00000394986 EWSR1Q01844 656 aaKnown RBP eCLIP14.88□□□□□ -0.03
SNCA-203ENST00000394986 WFDC3Q8IUB2 231 aa14.88□□□□□ -0.03
SNCA-203ENST00000394986 B9D2Q9BPU9 175 aa14.88□□□□□ -0.03
SNCA-203ENST00000394986 C19orf73Q9NVV2 129 aa14.88□□□□□ -0.03
SNCA-203ENST00000394986 OR11H12B2RN74 326 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 NHLH2Q02577 135 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 TEPPQ6URK8 271 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 C16orf54Q6UWD8 224 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 BPIFCQ8NFQ6 507 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 GLMPQ8WWB7 406 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 GRAMD2BQ96HH9 432 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 ASCL2Q99929 193 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 UQCC1Q9NVA1 299 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 DOK5Q9P104 306 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 MBD2Q9UBB5 411 aa14.87□□□□□ -0.03
SNCA-203ENST00000394986 DNAH9Q9NYC9 4486 aa14.86□□□□□ -0.03
SNCA-203ENST00000394986 OR4C46A6NHA9 309 aa14.86□□□□□ -0.03
SNCA-203ENST00000394986 ORM2P19652 201 aa14.86□□□□□ -0.03
SNCA-203ENST00000394986 ODF3L2Q3SX64 289 aa14.86□□□□□ -0.03
SNCA-203ENST00000394986 MS4A6AQ9H2W1 248 aa14.86□□□□□ -0.03
SNCA-203ENST00000394986 UBE2L5PA0A1B0GUS4 154 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 BUB3O43684 328 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 S100A11P31949 105 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 STXBP6Q8NFX7 210 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 OR1B1Q8NGR6 318 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 MGST2Q99735 147 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 TMEM147Q9BVK8 224 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 TUBA4BQ9H853 241 aa14.85□□□□□ -0.03
SNCA-203ENST00000394986 AGPAT2O15120 278 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 LINC00869P0C866 280 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 PET100P0DJ07 73 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 HBG1P69891 147 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 HBG2P69892 147 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 VWC2Q2TAL6 325 aa14.84□□□□□ -0.03
SNCA-203ENST00000394986 PPP1R14BQ96C90 147 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms