RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 GNB4Q9HAV0 340 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-202ENST00000394888 NDUFA3O95167 84 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 TAS2R60P59551 318 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 SLC35B1P78383 322 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 TPTE2P1Q5T6R2 138 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 PFDN5Q99471 154 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 RNF2Q99496 336 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 COX7A2P2O60397 106 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 CDKN1AP38936 164 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 MISP3Q96FF7 219 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 ENSAO43768 121 aaKnown RBP12.17□□□□□ -0.46
CPSF7-202ENST00000394888 SLAQ13239 276 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 KLRD1Q13241 179 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 TMEM183BQ1AE95 376 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 PRSS22Q9GZN4 317 aa12.17□□□□□ -0.46
CPSF7-202ENST00000394888 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
CPSF7-202ENST00000394888 CFAP46Q8IYW2 2715 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 KIR2DL5BA0A0G2JN68 375 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 KIR2DL5BA0A0G2JPC4 375 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 TIMM23O14925 209 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 IBA57Q5T440 356 aaKnown RBP12.16□□□□□ -0.46
CPSF7-202ENST00000394888 KIR2DL5AQ8N109 375 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
CPSF7-202ENST00000394888 COX7A1P24310 79 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-202ENST00000394888 SRSF12Q8WXF0 261 aaKnown RBP12.16□□□□□ -0.46
CPSF7-202ENST00000394888 SPTBN4Q9H254 2564 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 C19orf71A6NCJ1 209 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 NPBQ8NG41 125 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 OR1L4Q8NGR5 311 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 NUDT11Q96G61 164 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 SSBP3Q9BWW4 388 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-202ENST00000394888 ZNF586Q9NXT0 402 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 INSIG2Q9Y5U4 225 aa12.16□□□□□ -0.46
CPSF7-202ENST00000394888 UTP20O75691 2785 aaKnown RBP12.15□□□□□ -0.46
CPSF7-202ENST00000394888 SNURFLB1AK76 121 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 CCL21O00585 134 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 SPINK4O60575 86 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 TCL1AP56279 114 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 Q8N6K4 173 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 LTAP01374 205 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 RBPJQ06330 500 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 TMEM18Q96B42 140 aa12.15□□□□□ -0.46
CPSF7-202ENST00000394888 PSG1P11464 419 aa12.15□□□□□ -0.47
CPSF7-202ENST00000394888 NDPQ00604 133 aa12.15□□□□□ -0.47
CPSF7-202ENST00000394888 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.47
CPSF7-202ENST00000394888 C17orf77Q96MU5 243 aa12.15□□□□□ -0.47
CPSF7-202ENST00000394888 EPDR1Q9UM22 224 aa12.15□□□□□ -0.47
CPSF7-202ENST00000394888 ZFP36P26651 326 aaKnown RBP12.14□□□□□ -0.47
CPSF7-202ENST00000394888 TRBV9A0A0B4J1U6 114 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF7-202ENST00000394888 PRRX1P54821 245 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 OR1B1Q8NGR6 318 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 ABCA4P78363 2273 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-202ENST00000394888 ORM2P19652 201 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
CPSF7-202ENST00000394888 CD24P25063 80 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 H3BTX0 84 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 NHLH1Q02575 133 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 FBXL7Q9UJT9 491 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 PTPRZ1P23471 2315 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-202ENST00000394888 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
CPSF7-202ENST00000394888 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
CPSF7-202ENST00000394888 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-202ENST00000394888 TIGITQ495A1 244 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 ZNF600Q6ZNG1 722 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 TEX43Q6ZNM6 134 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 RNF5Q99942 180 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 IGLC2P0DOY2 106 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 DTX2Q86UW9 622 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 A0A1W2PS18 150 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 CRISP2P16562 243 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 BPIFB3P59826 476 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 NIT1Q86X76 327 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
CPSF7-202ENST00000394888 AMY1AP04745 511 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 PERPQ96FX8 193 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-202ENST00000394888 NDUFS7O75251 213 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 TOMM40O96008 361 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 LIPFP07098 398 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 KLRB1Q12918 225 aa12.11□□□□□ -0.47
CPSF7-202ENST00000394888 PRR31Q5SQ13 230 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms