RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 RPL8P62917 257 aaKnown RBP5.56□□□□□ -1.52
RTN4-205ENST00000394609 RPL19P84098 196 aaKnown RBP5.56□□□□□ -1.52
RTN4-205ENST00000394609 Q0VG73 95 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 PDLIM3Q53GG5 364 aaPredicted RBP5.56□□□□□ -1.52
RTN4-205ENST00000394609 C10orf55Q5SWW7 151 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 TOMM20LQ6UXN7 152 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 KIR3DL3Q8N743 410 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 OR10P1Q8NGE3 313 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 OR10W1Q8NGF6 305 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 TMEM37Q8WXS4 190 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 TAF15Q92804 592 aaKnown RBP eCLIP5.56□□□□□ -1.52
RTN4-205ENST00000394609 TBX15Q96SF7 602 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 RSG1Q9BU20 258 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 PARLQ9H300 379 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 ZNF430Q9H8G1 570 aaPredicted RBP5.56□□□□□ -1.52
RTN4-205ENST00000394609 ENY2Q9NPA8 101 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
RTN4-205ENST00000394609 DOPEY2Q9Y3R5 2298 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 NPIPB6E9PJ23 425 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 NDUFS8O00217 210 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 CEACAM3P40198 252 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 CDKN1BP46527 198 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 RPL29P47914 159 aaKnown RBP5.55□□□□□ -1.52
RTN4-205ENST00000394609 LGALS7P47929 136 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 LGALS4P56470 323 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 CLEC12BQ2HXU8 276 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 VMA21Q3ZAQ7 101 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 LCN15Q6UWW0 184 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 ZNF705AQ6ZN79 300 aaPredicted RBP5.55□□□□□ -1.52
RTN4-205ENST00000394609 DYNAPQ8N1N2 210 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 CMTM2Q8TAZ6 248 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 TMEM167AQ8TBQ9 72 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 RNF2Q99496 336 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 COMMD5Q9GZQ3 224 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 PLEKHA3Q9HB20 300 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 ZNF257Q9Y2Q1 563 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 TRAPPC1Q9Y5R8 145 aa5.55□□□□□ -1.52
RTN4-205ENST00000394609 ANKRD17O75179 2603 aaKnown RBP5.54□□□□□ -1.52
RTN4-205ENST00000394609 IGHV3OR16-10A0A075B7F0 116 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 C20orf202A1L168 122 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 TOMM40O96008 361 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 CA2P00918 260 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 IGKV1D-33P01593 117 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 IGKV1-33P01594 117 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 APELAP0DMC3 54 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 USF1P22415 310 aaPredicted RBP5.54□□□□□ -1.52
RTN4-205ENST00000394609 GNB1P62873 340 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 RPP30P78346 268 aaKnown RBP5.54□□□□□ -1.52
RTN4-205ENST00000394609 PRCDQ00LT1 54 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 PSG5Q15238 335 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 MRGPRG-AS1Q2M3A8 158 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 SSX7Q7RTT5 188 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 OR5B3Q8NH48 314 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 VSTM2AQ8TAG5 236 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 C22orf15Q8WYQ4 148 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 SLC35E1Q96K37 410 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 FBXL15Q9H469 300 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 KCNIP2Q9NS61 270 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 LY96Q9Y6Y9 160 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 CGB1A6NKQ9 187 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 FCN1O00602 326 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 MT-ND6P03923 174 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 NPY1RP25929 384 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 SAA4P35542 130 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 UBE2E1P51965 193 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 HES1Q14469 280 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 PRSS8Q16651 343 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 VWC2Q2TAL6 325 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 LEMD1Q68G75 181 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 LINC01551Q86U37 167 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 RPP25LQ8N5L8 163 aaKnown RBP5.54□□□□□ -1.52
RTN4-205ENST00000394609 KLHDC1Q8N7A1 406 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 MAPK1IP1LQ8NDC0 245 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 SLC24A4Q8NFF2 622 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 OR1L8Q8NGR8 309 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 OR4A5Q8NH83 315 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 CFHR4Q92496 578 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 TMEM147Q9BVK8 224 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 NDUFA4L2Q9NRX3 87 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 UQCR10Q9UDW1 63 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 SIGLEC9Q9Y336 463 aa5.54□□□□□ -1.52
RTN4-205ENST00000394609 CENPVL3A0A0U1RRI6 287 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 ZNF705FA8MVS1 300 aaPredicted RBP5.53□□□□□ -1.52
RTN4-205ENST00000394609 ACTL6BO94805 426 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 PPBPP02775 128 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 CRYGBP07316 175 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 ZNF705DP0CH99 300 aaPredicted RBP5.53□□□□□ -1.52
RTN4-205ENST00000394609 ZNF705BP0CI00 300 aaPredicted RBP5.53□□□□□ -1.52
RTN4-205ENST00000394609 CD1BP29016 333 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 CTRLP40313 264 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 RBX1P62877 108 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 PAX8Q06710 450 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 OR5I1Q13606 314 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 PLGLAQ15195 96 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 MMDQ15546 238 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 TNXAQ16473 311 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 TEX45Q8NA69 505 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 OR5AU1Q8NGC0 362 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms