RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 IGHV1-46P01743 117 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 NBEAP1P0C6P0 100 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 SRSF7Q16629 238 aaKnown RBP eCLIP4.69□□□□□ -1.66
RFFL-202ENST00000394597 GAGE13Q4V321 117 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 NMSQ5H8A3 153 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 ZNF497Q6ZNH5 498 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 HAPLN4Q86UW8 402 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 NUP37Q8NFH4 326 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 NEU4Q8WWR8 484 aaPredicted RBP4.69□□□□□ -1.66
RFFL-202ENST00000394597 OSTCQ9NRP0 149 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 MRPL27Q9P0M9 148 aaKnown RBP4.69□□□□□ -1.66
RFFL-202ENST00000394597 INSIG2Q9Y5U4 225 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 CHD9Q3L8U1 2897 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 K7EP34 96 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 RAMP3O60896 148 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 SSTR5P35346 364 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 RPL13AP40429 203 aaKnown RBP4.69□□□□□ -1.66
RFFL-202ENST00000394597 PSMB2P49721 201 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 ETDBQ3ZM63 59 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 ZDHHC16Q969W1 377 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 FLYWCH2Q96CP2 140 aaKnown RBP4.69□□□□□ -1.66
RFFL-202ENST00000394597 ZC2HC1AQ96GY0 325 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 SGK494Q96LW2 274 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 SRRM5B3KS81 715 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 TAX1BP3O14907 124 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 SMIM17P0DL12 118 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 COX6B1P14854 86 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 PAX1P15863 534 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 CX3CL1P78423 397 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 ZFAND6Q6FIF0 208 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 PDPNQ86YL7 162 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 DRAM1Q8N682 238 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 OR13A1Q8NGR1 328 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 OR1L4Q8NGR5 311 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 RCHY1Q96PM5 261 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 TEX48A0A1B0GUV7 120 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 HIGD1CA8MV81 97 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 G3V4G9 280 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 H3BRM9 83 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 MEF2CQ06413 473 aaPredicted RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 GUSBP1Q15486 140 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 LYPD6Q86Y78 171 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 ZCCHC24Q8N2G6 241 aaKnown RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 ZNF414Q96IQ9 312 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 ZNF479Q96JC4 524 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 MRPL16Q9NX20 251 aaKnown RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 DKK4Q9UBT3 224 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 EML5Q05BV3 1969 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 PLCE1Q9P212 2302 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 BPTFQ12830 3046 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 MLNRO43193 412 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 IGLV1-44P01699 117 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 APOHP02749 345 aaPredicted RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 IL4P05112 153 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 PRR31Q5SQ13 230 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 C1orf122Q6ZSJ8 110 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 FAM216BQ8N7L0 139 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 OR4A5Q8NH83 315 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 GRAMD2BQ96HH9 432 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 C1orf147Q96MC9 270 aaPredicted RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 PRNDQ9UKY0 176 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 PKDREJQ9NTG1 2253 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 A0A1W2PRD5 423 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 A0A1W2PRF3 423 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 A0A1W2PRM7 423 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 NCBP2LA6PVI3 153 aaKnown RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 ZNF114Q8NC26 417 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 C18orf32Q8TCD1 76 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 DCTN5Q9BTE1 182 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
RFFL-202ENST00000394597 TNRC6AQ8NDV7 1962 aaKnown RBP4.68□□□□□ -1.66
RFFL-202ENST00000394597 B5MCH6 92 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 IGLC1P0CG04 106 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 KRTAP27-1Q3LI81 207 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 TTC9CQ8N5M4 171 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 OR9G4Q8NGQ1 327 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 HARBI1Q96MB7 349 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 GNLYP22749 145 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 REG1BP48304 166 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 EMP1P54849 157 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 GAGE2BQ13066 116 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 GAGE2EQ4V326 116 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 Q6P435 159 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 SFTA2Q6UW10 78 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 SMIM20Q8N5G0 67 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 OR9G1Q8NH87 305 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 LEAP2Q969E1 77 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 HES4Q9HCC6 221 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 GAGE2DQ9UEU5 116 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 MKI67P46013 3256 aaKnown RBP4.67□□□□□ -1.66
RFFL-202ENST00000394597 BRCA2P51587 3418 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 J3KRW8 73 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 ORM2P19652 201 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 Q6ZSR3 168 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 BCL6BQ8N143 479 aaPredicted RBP4.67□□□□□ -1.66
RFFL-202ENST00000394597 ABHD12Q8N2K0 398 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 OR52E5Q8NH55 327 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 FAM222BQ8WU58 562 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 LIME1Q9H400 295 aa4.67□□□□□ -1.66
RFFL-202ENST00000394597 COL5A1P20908 1838 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms