RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 ANKRD17O75179 2603 aaKnown RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIVEP2P31629 2446 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 TEX15Q9BXT5 2789 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 TMEM11P17152 192 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 CX3CL1P78423 397 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 MAPK1IP1LQ8NDC0 245 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 OR1P1Q8NH06 330 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 RASL11BQ9BPW5 248 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 OR51M1Q9H341 326 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 F11RQ9Y624 299 aaKnown RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 FN1P02751 2386 aaKnown RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 GNG5P63218 68 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 OR11H6Q8NGC7 330 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 TMUB1Q9BVT8 246 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 SLC25A2Q9BXI2 301 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 RNASE7Q9H1E1 156 aaKnown RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 ZMAT5Q9UDW3 170 aaKnown RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 DMRT1Q9Y5R6 373 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 M0R1W7 72 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 IGHV4-39P01824 125 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 CRYGBP07316 175 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 RD3LP0DJH9 198 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 PSG1P11464 419 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 ATP5J2P56134 94 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 BRD3OSQ6XYD6 125 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 OR1L4Q8NGR5 311 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 RBM14Q96PK6 669 aaKnown RBP8.85□□□□□ -0.99
TCOF1-203ENST00000394269 PFDN5Q99471 154 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 CCL19Q99731 98 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 FNDC10F2Z333 226 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 HYPMO75409 117 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 PFN1P07737 140 aaKnown RBP8.85□□□□□ -0.99
TCOF1-203ENST00000394269 OR10G8Q8NGN5 311 aa8.85□□□□□ -0.99
TCOF1-203ENST00000394269 HOXB4P17483 251 aaPredicted RBP8.84□□□□□ -0.99
TCOF1-203ENST00000394269 ECSCRQ19T08 205 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 MALSU1Q96EH3 234 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 TMEM242Q9NWH2 141 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 SAA4P35542 130 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 SELENOTP62341 195 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 C5orf64Q2M2E5 130 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 TMEM219Q86XT9 240 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 GPR61Q9BZJ8 451 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 NIT2Q9NQR4 276 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 LINC00527Q9UJ94 153 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 PGPA6NDG6 321 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 K7EN84 100 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 CA1P00915 261 aaPredicted RBP8.84□□□□□ -0.99
TCOF1-203ENST00000394269 C9orf152Q5JTZ5 239 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 CFHR4Q92496 578 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 FAM167A-AS1Q96KT0 104 aa8.84□□□□□ -0.99
TCOF1-203ENST00000394269 OR2J3O76001 311 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 SLC25A5P05141 298 aaKnown RBP8.83□□□□□ -1
TCOF1-203ENST00000394269 FABP1P07148 127 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 S100A2P29034 98 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 Q56UQ5 140 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 CCDC144NLQ6NUI1 221 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 PPP1R2P9O14990 202 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 GNG7O60262 68 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 RAB4BP61018 213 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 LMO4P61968 165 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 NDPQ00604 133 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 PRR31Q5SQ13 230 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 FAM168AQ92567 244 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 MAS1LP35410 378 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 TEX38Q6PEX7 206 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 Q71RC1 249 aaPredicted RBP8.83□□□□□ -1
TCOF1-203ENST00000394269 ARPC1AQ92747 370 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 ASCL2Q99929 193 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 C19orf24Q9BVV8 132 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 TENM4Q6N022 2769 aa8.83□□□□□ -1
TCOF1-203ENST00000394269 FSTL3O95633 263 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 NBEAP1P0C6P0 100 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 FABP4P15090 132 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 TMEM249Q2WGJ8 235 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 MS4A10Q96PG2 267 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 TXNDC17Q9BRA2 123 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 F8P00451 2351 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 TRBV24-1A0A075B6N3 115 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 IGHV4-61A0A0C4DH41 118 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 IGHV2-70DA0A0C4DH43 119 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 IL4P05112 153 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 FAM106CPP0CH98 169 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 TMEM116Q8NCL8 245 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 TBX15Q96SF7 602 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 SOX21Q9Y651 276 aaPredicted RBP8.82□□□□□ -1
TCOF1-203ENST00000394269 NBPF19A0A087WUL8 3843 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
TCOF1-203ENST00000394269 ODF3BA8MYP8 253 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 INS-IGF2F8WCM5 200 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 CORTO00230 105 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 FCGR2BP31994 310 aaPredicted RBP8.82□□□□□ -1
TCOF1-203ENST00000394269 MAJINQ3KP22 176 aa8.82□□□□□ -1
TCOF1-203ENST00000394269 FAM209BQ5JX69 171 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms