RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 PRR20EP86478 221 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 PRR20CP86479 221 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 PRR20DP86480 221 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 PRR20BP86481 221 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 PRR20AP86496 221 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 KLF9Q13886 244 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 SMCO1Q147U7 214 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 PSMG4Q5JS54 123 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 ETFRF1Q6IPR1 90 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 MORN3Q6PF18 240 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 DTD1Q8TEA8 209 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 U3KQ87 197 aa13.21□□□□□ -0.29
PDLIM7-205ENST00000393551 IGKV1D-37A0A075B6S9 117 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 ELOA3CA0A087WX78 387 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 FAM90A26D6RGX4 464 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 LGI3Q8N145 548 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 OR51G1Q8NGK1 321 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 TRIM63Q969Q1 353 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 SCGB3A2Q96PL1 93 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 HRH4Q9H3N8 390 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 CACFD1Q9UGQ2 172 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
PDLIM7-205ENST00000393551 PITX3O75364 302 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 IFNA4P05014 189 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 EIF2B2P49770 351 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 AP2S1P53680 142 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 GAMTQ14353 236 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 TMEM41BQ5BJD5 291 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 NOXA1Q86UR1 476 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 C2CD4CQ8TF44 421 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 NRN1Q9NPD7 142 aa13.19□□□□□ -0.3
PDLIM7-205ENST00000393551 MIFP14174 115 aa13.18□□□□□ -0.3
PDLIM7-205ENST00000393551 ZNF90Q03938 601 aa13.18□□□□□ -0.3
PDLIM7-205ENST00000393551 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
PDLIM7-205ENST00000393551 APLNQ9ULZ1 77 aa13.18□□□□□ -0.3
PDLIM7-205ENST00000393551 V9GYH0 126 aa13.18□□□□□ -0.3
PDLIM7-205ENST00000393551 H3BMM0 161 aa13.17□□□□□ -0.3
PDLIM7-205ENST00000393551 HLA-DMBP28068 263 aa13.17□□□□□ -0.3
PDLIM7-205ENST00000393551 DEFB1P60022 68 aa13.17□□□□□ -0.3
PDLIM7-205ENST00000393551 ZNF79Q15937 498 aa13.17□□□□□ -0.3
PDLIM7-205ENST00000393551 GSG1LQ6UXU4 331 aa13.17□□□□□ -0.3
PDLIM7-205ENST00000393551 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-205ENST00000393551 GPX4P36969 197 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 Q6ZTC4 211 aa13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 OR1S1Q8NH92 325 aa13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 WDR12Q9GZL7 423 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 TBC1D24Q9ULP9 559 aa13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 CELA1Q9UNI1 258 aa13.16□□□□□ -0.3
PDLIM7-205ENST00000393551 DNAH17Q9UFH2 4485 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 IGLL5B9A064 214 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 ANXA3P12429 323 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 SRPXP78539 464 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 TMEM128Q5BJH2 165 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 TMED4Q7Z7H5 227 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 PBDC1Q9BVG4 233 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 XCL2Q9UBD3 114 aa13.15□□□□□ -0.3
PDLIM7-205ENST00000393551 ZFP92A6NM28 416 aa13.14□□□□□ -0.31
PDLIM7-205ENST00000393551 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
PDLIM7-205ENST00000393551 S100A5P33763 92 aa13.14□□□□□ -0.31
PDLIM7-205ENST00000393551 ATP5IP56385 69 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-205ENST00000393551 TCTAP57738 103 aa13.14□□□□□ -0.31
PDLIM7-205ENST00000393551 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
PDLIM7-205ENST00000393551 DUXBA0A1W2PPF3 345 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 SOCS3O14543 225 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 IAPPP10997 89 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 NKX2-1P43699 371 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 PYDC2Q56P42 97 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 TOMM5Q8N4H5 51 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 S100ZQ8WXG8 99 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
PDLIM7-205ENST00000393551 HERC2O95714 4834 aa13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 PRSS46E5RG02 174 aa13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 FAUP35544 74 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 C12orf74Q32Q52 190 aa13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 ZNF767PQ75MW2 155 aa13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 SCRT1Q9BWW7 348 aa13.12□□□□□ -0.31
PDLIM7-205ENST00000393551 SLC25A6P12236 298 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 VAMP1P23763 118 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 LYZP61626 148 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 PPP1R1AQ13522 171 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 OR2F1Q13607 317 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 THAP8Q8NA92 274 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 C17orf77Q96MU5 243 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 TRGV9Q99603 122 aa13.11□□□□□ -0.31
PDLIM7-205ENST00000393551 TRAV10A0A0B4J240 114 aa13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 SNRPGP15A8MWD9 76 aa13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 SFT2D2O95562 160 aa13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 CCDC190Q86UF4 302 aa13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 ZNF709Q8N972 641 aa13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
PDLIM7-205ENST00000393551 MAGT1Q9H0U3 335 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms