RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 LCN12Q6JVE5 192 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 PPP1R27Q86WC6 154 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 OR4X1Q8NH49 305 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 GPX7Q96SL4 187 aaPredicted RBP6.67□□□□□ -1.34
LIMS1-203ENST00000393310 CCL13Q99616 98 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 MDFIQ99750 246 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 SH3BGRL3Q9H299 93 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 EML5Q05BV3 1969 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 TRAV18A0A075B6X5 111 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 TRAV8-1A0A0A6YYK1 113 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 ARFRP1Q13795 201 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 Q1RN00 199 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 DEFB112Q30KQ8 113 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 MPV17L2Q567V2 206 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 IGHA1P01876 353 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 OR9G9P0C7N8 305 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 SFXN4Q6P4A7 337 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 PAQR4Q8N4S7 273 aaPredicted RBP6.67□□□□□ -1.34
LIMS1-203ENST00000393310 KLHL30-AS1Q8NEE0 82 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM178BH3BS89 294 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 H7C1H1 209 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 J3QT63 122 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 NDUFB6O95139 128 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 SPATA25Q9BR10 227 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 C11orf68Q9H3H3 251 aaKnown RBP6.66□□□□□ -1.34
LIMS1-203ENST00000393310 FRYQ5TBA9 3013 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 NDUFB4O95168 129 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 NTN1O95631 604 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 PPP1CCP36873 323 aaKnown RBP6.66□□□□□ -1.34
LIMS1-203ENST00000393310 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 SMIM4Q8WVI0 70 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 MBOAT4Q96T53 435 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 MANBALQ9NQG1 85 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 NDUFB11Q9NX14 153 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 RABAC1Q9UI14 185 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 IQCF6A8MYZ5 107 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 IGKV3-15P01624 115 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 CD55P08174 381 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 SLC25A6P12236 298 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 PTGDSP41222 190 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 PSMB2P49721 201 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 ZNF133P52736 654 aaPredicted RBP6.66□□□□□ -1.34
LIMS1-203ENST00000393310 MORN2Q502X0 79 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM42Q69YG0 159 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 BRD3OSQ6XYD6 125 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM219Q86XT9 240 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 GCN1Q92616 2671 aaKnown RBP6.66□□□□□ -1.34
LIMS1-203ENST00000393310 FAM231BA6NCW3 169 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 MGST3O14880 152 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 TBX6O95947 436 aaPredicted RBP6.66□□□□□ -1.34
LIMS1-203ENST00000393310 CRYBB3P26998 211 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 UBE2G1P62253 170 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 PSG5Q15238 335 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 FGFRL1Q8N441 504 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 RCHY1Q96PM5 261 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 SCN2AQ99250 2005 aa6.66□□□□□ -1.34
LIMS1-203ENST00000393310 J3QLW9 94 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 IL4P05112 153 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 HBG2P69892 147 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 ZNF85Q03923 595 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 CIARTQ8N365 385 aaPredicted RBP6.65□□□□□ -1.34
LIMS1-203ENST00000393310 OR9G1Q8NH87 305 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 OR1L1Q8NH94 360 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 GPR146Q96CH1 333 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 FOXA2Q9Y261 457 aaPredicted RBP6.65□□□□□ -1.34
LIMS1-203ENST00000393310 TRAV8-4A0A0B4J246 113 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 A8MWV9 139 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 LY6HO94772 140 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 NAPSAO96009 420 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 SBK3P0C264 359 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 EDN2P20800 178 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 CD300LDQ6UXZ3 194 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 HAPLN4Q86UW8 402 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 OR51G1Q8NGK1 321 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 MAL2Q969L2 176 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 WNT10AQ9GZT5 417 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 WFDC1Q9HC57 220 aa6.65□□□□□ -1.34
LIMS1-203ENST00000393310 OR5AL1P0C617 328 aa6.65□□□□□ -1.35
LIMS1-203ENST00000393310 MALP21145 153 aa6.65□□□□□ -1.35
LIMS1-203ENST00000393310 APOC4P55056 127 aa6.65□□□□□ -1.35
LIMS1-203ENST00000393310 FCGR3AP08637 254 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 ARHGEF39Q8N4T4 335 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 GNB4Q9HAV0 340 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 VSIG4Q9Y279 399 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 ATG2AQ2TAZ0 1938 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 TMEM30CPA0ZSE6 113 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 HMGN4O00479 90 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 HLA-DRB1P01911 266 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 ATP5L2Q7Z4Y8 100 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 ARPC1AQ92747 370 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 HILPDAQ9Y5L2 63 aa6.64□□□□□ -1.35
LIMS1-203ENST00000393310 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms