RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
MKS1-203ENST00000393120 UBE2E1P51965 193 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
MKS1-203ENST00000393120 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
MKS1-203ENST00000393120 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 NBASA2RRP1 2371 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 A0A1W2PRD5 423 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 A0A1W2PRF3 423 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 A0A1W2PRM7 423 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 RD3LP0DJH9 198 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 CD24P25063 80 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 CX3CL1P78423 397 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
MKS1-203ENST00000393120 TMEM183BQ1AE95 376 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 FAM231DQ6ZW35 169 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 TTC9CQ8N5M4 171 aa11.31□□□□□ -0.6
MKS1-203ENST00000393120 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 TOX4O94842 621 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 FABP4P15090 132 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
MKS1-203ENST00000393120 FBLN7Q53RD9 439 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 PDZD11Q5EBL8 140 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 COL6A6A6NMZ7 2263 aa11.3□□□□□ -0.6
MKS1-203ENST00000393120 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 HIST1H1BP16401 226 aaKnown RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 COX19Q49B96 90 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 ASPHD1Q5U4P2 390 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 IGFBPL1Q8WX77 278 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 RNASE7Q9H1E1 156 aaKnown RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 GSN-AS1Q9NRJ2 163 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 POLR3KQ9Y2Y1 108 aaPredicted RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 SMIM27A0A1W2PRY6 76 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 PGPA6NDG6 321 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 TOMM40O96008 361 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 LYZP61626 148 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 RBM14Q96PK6 669 aaKnown RBP11.29□□□□□ -0.6
MKS1-203ENST00000393120 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 BPESC1Q9GZL8 116 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
MKS1-203ENST00000393120 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 SLC25A5P05141 298 aaKnown RBP11.28□□□□□ -0.6
MKS1-203ENST00000393120 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
MKS1-203ENST00000393120 MGST1P10620 155 aaKnown RBP11.28□□□□□ -0.6
MKS1-203ENST00000393120 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 SHANK2-AS3Q9BTD1 123 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
MKS1-203ENST00000393120 GNB1LQ9BYB4 327 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 LPAR2Q9HBW0 351 aa11.28□□□□□ -0.6
MKS1-203ENST00000393120 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.6
MKS1-203ENST00000393120 AMBPP02760 352 aa11.27□□□□□ -0.6
MKS1-203ENST00000393120 TMEM11P17152 192 aa11.27□□□□□ -0.6
MKS1-203ENST00000393120 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.6
MKS1-203ENST00000393120 BLNKQ8WV28 456 aa11.27□□□□□ -0.6
MKS1-203ENST00000393120 CHRDL1Q9BU40 450 aa11.27□□□□□ -0.6
MKS1-203ENST00000393120 ZZEF1O43149 2961 aa11.27□□□□□ -0.6
MKS1-203ENST00000393120 NCOR2Q9Y618 2525 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 BRS3P32247 399 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 MFAP4P55083 255 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 Q9H3A6 140 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 OTORQ9NRC9 128 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 THYN1Q9P016 225 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
MKS1-203ENST00000393120 MT-ND6P03923 174 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 ADMP35318 185 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 UBE2G1P62253 170 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 GNG5P63218 68 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 NDPQ00604 133 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 KLK9Q2XQG4 91 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 WDR73Q6P4I2 378 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 Q8N9W7 124 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 GPR82Q96P67 336 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 MLST8Q9BVC4 326 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
MKS1-203ENST00000393120 IGHV7-81A0A0B4J1V7 117 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
MKS1-203ENST00000393120 H3BRN7 92 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms