RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 CDKL4Q5MAI5 379 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 HAGHLQ6PII5 290 aaPredicted RBP0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 EXOC3-AS1Q8N2X6 119 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 WFDC5Q8TCV5 224 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 TAS2R7Q9NYW3 318 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 KIAA1549Q9HCM3 1950 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 CASP8AP2Q9UKL3 1982 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 CETN3O15182 167 aa0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 NKX2-5P52952 324 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 C2orf82Q6UX34 121 aa0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 ADAT3Q96EY9 351 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 C2orf50Q96LR7 162 aa0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 LINC00052Q96N35 136 aa0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 GPER1Q99527 375 aa0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 VPS29Q9UBQ0 182 aa0.03□□□□□ -2.4
SNORA40.4-201ENST00000390971 M0R378 163 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 GADD45GO95257 159 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 TTRP02766 147 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 RHOBP62745 196 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 GDPD1Q8N9F7 314 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 TSKUQ8WUA8 353 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 SLAMF6Q96DU3 332 aa0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 C1orf196B1AJZ1 125 aa0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 K7EIL1 84 aa0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 GRINAQ7Z429 371 aa0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 CMSS1Q9BQ75 279 aaKnown RBP0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 FAM236DA0A1B0GTK5 79 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 J3QRK9 145 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 M0R036 132 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 IFNA16P05015 189 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 SERPINA6P08185 405 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 FAM236CP0DP71 79 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 AP3S2P59780 193 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 OR6V1Q8N148 313 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 SLC30A7Q8NEW0 376 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 OR2T35Q8NGX2 323 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 C8orf76Q96K31 380 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 TP53RKQ96S44 253 aa0□□□□□ -2.41
SNORA40.4-201ENST00000390971 NOSIPQ9Y314 301 aaKnown RBP0□□□□□ -2.41
SNORA40.4-201ENST00000390971 ZNF106Q9H2Y7 1883 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 RIMBP3CA6NJZ7 1639 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 RIMBP3BA6NNM3 1639 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 RIMBP3Q9UFD9 1639 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 ASH1LQ9NR48 2969 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 AHSA1O95433 338 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 HOXA6P31267 233 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 DYNLT1P63172 113 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 Q8IYB0 196 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 C12orf45Q8N5I9 185 aaPredicted RBP-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 CT55Q8WUE5 264 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 PSMF1Q92530 271 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 LINC00467Q9BRT7 94 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 PRADC1Q9BSG0 188 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 RNF122Q9H9V4 155 aa-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 SYNE1Q8NF91 8797 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.4-201ENST00000390971 CLDN24A6NM45 220 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 COTL1Q14019 142 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 C12orf74Q32Q52 190 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 CLDN22Q8N7P3 220 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 FAM172AQ8WUF8 416 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 BORCS7Q96B45 105 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 PSTPIP2Q9H939 334 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 IDI2-AS1Q9NZ38 188 aa-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 PHRF1Q9P1Y6 1649 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.4-201ENST00000390971 CYB5BO43169 146 aa-0.03□□□□□ -2.41
SNORA40.4-201ENST00000390971 SERPINE1P05121 402 aa-0.03□□□□□ -2.41
SNORA40.4-201ENST00000390971 PPIBP23284 216 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.4-201ENST00000390971 ZNF833PQ6ZTB9 187 aa-0.03□□□□□ -2.41
SNORA40.4-201ENST00000390971 FBXO5Q9UKT4 447 aa-0.03□□□□□ -2.41
SNORA40.4-201ENST00000390971 CITO14578 2027 aa-0.04□□□□□ -2.42
SNORA40.4-201ENST00000390971 TIMM17BO60830 172 aa-0.04□□□□□ -2.42
SNORA40.4-201ENST00000390971 Q6ZS92 163 aa-0.04□□□□□ -2.42
SNORA40.4-201ENST00000390971 OR10AC1Q8NH08 325 aa-0.04□□□□□ -2.42
SNORA40.4-201ENST00000390971 PLXND1Q9Y4D7 1925 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 hCG_1818297A0A087WSY0 165 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 A8MT66 165 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 CNIH1O95406 144 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 FOXA3P55318 350 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 IAH1Q2TAA2 248 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 C4orf22Q6V702 233 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 OR52L1Q8NGH7 329 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 MED29Q9NX70 200 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 CECR2Q9BXF3 1484 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 BDP1A6H8Y1 2624 aa-0.05□□□□□ -2.42
SNORA40.4-201ENST00000390971 SCN10AQ9Y5Y9 1956 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 hADV38S2A0JD32 116 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 H3BRM9 83 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 SMIM17P0DL12 118 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 RNASE4P34096 147 aaKnown RBP-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 CANT1Q8WVQ1 401 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 TMEM133Q9H2Q1 129 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 TVP23BQ9NYZ1 205 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 MUC4Q99102 2169 aa-0.06□□□□□ -2.42
SNORA40.4-201ENST00000390971 CD2P06729 351 aa-0.07□□□□□ -2.42
SNORA40.4-201ENST00000390971 EIF5AP63241 154 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.4-201ENST00000390971 TEN1Q86WV5 123 aa-0.07□□□□□ -2.42
SNORA40.4-201ENST00000390971 ATOH7Q8N100 152 aa-0.07□□□□□ -2.42
SNORA40.4-201ENST00000390971 PCTPQ9UKL6 214 aa-0.07□□□□□ -2.42
SNORA40.4-201ENST00000390971 TNCP24821 2201 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms