RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 WRBO00258 174 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 IL4P05112 153 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 LYL1P12980 280 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 TFPI2P48307 235 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 APOC4P55056 127 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 PAX9P55771 341 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 ZNF90Q03938 601 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 C4orf46Q504U0 113 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 STPG3Q8N7X2 389 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 OR51G1Q8NGK1 321 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 S100ZQ8WXG8 99 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 GRAMD2BQ96HH9 432 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 SLC35E1Q96K37 410 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 TRGV9Q99603 122 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 C20orf85Q9H1P6 137 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 TBC1D24Q9ULP9 559 aa8.39□□□□□ -1.07
IGHV4-28-201ENST00000390612 DNASE2O00115 360 aaPredicted RBP8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 IFNA21P01568 189 aa8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 NKX2-1P43699 371 aaPredicted RBP8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 POLR2GP62487 172 aaKnown RBP eCLIP8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 OR8G2PQ6IF36 304 aa8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 RNF183Q96D59 192 aa8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 RNF125Q96EQ8 232 aa8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 NARS2Q96I59 477 aaKnown RBP8.38□□□□□ -1.07
IGHV4-28-201ENST00000390612 ALMS1Q8TCU4 4167 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 HELTA6NFD8 242 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 ZFP92A6NM28 416 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 RPL35AP18077 110 aaKnown RBP8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 DEFB131AP59861 70 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 ASAH1Q13510 395 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 SPANXN5Q5MJ07 72 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 ZBTB8BQ8NAP8 495 aaPredicted RBP8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 CSTL1Q9H114 145 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 SEPSECSQ9HD40 501 aaKnown RBP8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 PTTG2Q9NZH5 202 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 RABAC1Q9UI14 185 aa8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 STRAPQ9Y3F4 350 aaKnown RBP8.37□□□□□ -1.07
IGHV4-28-201ENST00000390612 RYR2Q92736 4967 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 TRAV6A0A075B6T7 132 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 SNRPGP15A8MWD9 76 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 H3BP45 60 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 SPRY2O43597 315 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 EIF2B2P49770 351 aaKnown RBP8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 TAS2R30P59541 319 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 IFITM3Q01628 133 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 IAH1Q2TAA2 248 aaPredicted RBP8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 TMEM144Q7Z5S9 345 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 STXBP6Q8NFX7 210 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 ZNF431Q8TF32 576 aaPredicted RBP8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 NUDT15Q9NV35 164 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 PSENENQ9NZ42 101 aa8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 RCL1Q9Y2P8 373 aaKnown RBP8.36□□□□□ -1.07
IGHV4-28-201ENST00000390612 CFDP00746 253 aaPredicted RBP8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 MBPP02686 304 aaPredicted RBP8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 FABP1P07148 127 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 GIG44P09565 113 aaPredicted RBP8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 H2AFB2P0C5Z0 115 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 IL15RAQ13261 267 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 DEFB135Q30KP9 77 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 C1orf194Q5T5A4 169 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 SIGLEC15Q6ZMC9 328 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 TMEM182Q6ZP80 229 aaPredicted RBP8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 RAB40CQ96S21 281 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 SEC22CQ9BRL7 303 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
IGHV4-28-201ENST00000390612 FAM240BA0A1B0GVZ2 78 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 FNDC10F2Z333 226 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 SSSCA1O60232 199 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 TSC22D2O75157 780 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 UPK1BO75841 260 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 CCNKO75909 580 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 IL5P05113 134 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 ZNF688P0C7X2 276 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 ATF4P18848 351 aaPredicted RBP8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 NUP62P37198 522 aaPredicted RBP8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 OR2F1Q13607 317 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 ZFAND6Q6FIF0 208 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 TRPT1Q86TN4 253 aaKnown RBP8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 C12orf45Q8N5I9 185 aaPredicted RBP8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 IL17DQ8TAD2 202 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 WDR12Q9GZL7 423 aaKnown RBP8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 SLC45A2Q9UMX9 530 aa8.34□□□□□ -1.07
IGHV4-28-201ENST00000390612 C7orf66A4D0T2 115 aa8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 CCSO14618 274 aa8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 DLK1P80370 383 aa8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 EWSR1Q01844 656 aaKnown RBP eCLIP8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 ARL16Q0P5N6 197 aa8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 ZNF846Q147U1 533 aa8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 MZT2BQ6NZ67 158 aa8.33□□□□□ -1.08
IGHV4-28-201ENST00000390612 GATAD1Q8WUU5 269 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms