RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 LMO1P25800 156 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 BIVMQ86UB2 503 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 RNF166Q96A37 237 aaPredicted RBP8.38□□□□□ -1.07
PKP4-201ENST00000389757 IL36BQ9NZH7 164 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 PSG8Q9UQ74 426 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 SLC17A3O00476 420 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 CFHR2P36980 270 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 DEFB121Q5J5C9 76 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 PRELID3AQ96N28 172 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 TRGV9Q99603 122 aa8.38□□□□□ -1.07
PKP4-201ENST00000389757 PHF3Q92576 2039 aaKnown RBP8.38□□□□□ -1.07
PKP4-201ENST00000389757 TRGV11A0A075B6L2 103 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 SUPT4H1P63272 117 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 NTF4P34130 210 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 RPL15P61313 204 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 NMSQ5H8A3 153 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 GTF2H5Q6ZYL4 71 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 HS3ST6Q96QI5 342 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 REG4Q9BYZ8 158 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 GPR61Q9BZJ8 451 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 CCL20P78556 96 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 CIRBPQ14011 172 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 SRSF8Q9BRL6 282 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 GGTLC1Q9BX51 225 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 NCOR1P1Q9H4R4 102 aa8.37□□□□□ -1.07
PKP4-201ENST00000389757 PEF1Q9UBV8 284 aaKnown RBP8.37□□□□□ -1.07
PKP4-201ENST00000389757 DOPEY2Q9Y3R5 2298 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 A6NDN8 102 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 CBLN1P23435 193 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 LOXP28300 417 aaPredicted RBP8.36□□□□□ -1.07
PKP4-201ENST00000389757 ERVK11-1P61568 191 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 GCSAMLQ5JQS6 135 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 MEIG1Q5JSS6 88 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 TEX36Q5VZQ5 186 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 DMRTC2Q8IXT2 367 aaPredicted RBP8.36□□□□□ -1.07
PKP4-201ENST00000389757 KIR3DL3Q8N743 410 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 TMEM70Q9BUB7 260 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 SELENOKQ9Y6D0 94 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 SLC25A39Q9BZJ4 359 aaPredicted RBP8.36□□□□□ -1.07
PKP4-201ENST00000389757 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 IGKV1-16P04430 117 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
PKP4-201ENST00000389757 ZNF562Q6V9R5 426 aa8.36□□□□□ -1.07
PKP4-201ENST00000389757 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 ZNF688P0C7X2 276 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 LINC00205P59089 165 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 C9orf139Q6ZV77 190 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 Q71RC1 249 aaPredicted RBP8.35□□□□□ -1.07
PKP4-201ENST00000389757 TMEM190Q8WZ59 177 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 RAB37Q96AX2 223 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 SCRT1Q9BWW7 348 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 FAM208BQ5VWN6 2430 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 IFITM2Q01629 132 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 DOCK7Q96N67 2140 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 SOD3P08294 240 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 FOLR2P14207 255 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 PMCHL1Q16048 86 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 RNF151Q2KHN1 245 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 WDR86Q86TI4 376 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 WFDC12Q8WWY7 111 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 PRSS2P07478 247 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 SMIM6P0DI80 62 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 NDPQ00604 133 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
PKP4-201ENST00000389757 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 A6NJY4 79 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 OR11H12B2RN74 326 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 TMEM14EPQ6UXP3 125 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 WFDC1Q9HC57 220 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 HELZP42694 1942 aaKnown RBP8.34□□□□□ -1.07
PKP4-201ENST00000389757 ZNF98A6NK75 572 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 PLA2G5P39877 138 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 ZNRD1Q9P1U0 126 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 KLF2Q9Y5W3 355 aaPredicted RBP8.34□□□□□ -1.07
PKP4-201ENST00000389757 MPDZO75970 2070 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 MYLKQ15746 1914 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 ALKBH7Q9BT30 221 aaPredicted RBP8.34□□□□□ -1.07
PKP4-201ENST00000389757 ZNF256Q9Y2P7 627 aaPredicted RBP8.34□□□□□ -1.07
PKP4-201ENST00000389757 A0A1W2PNU3 283 aaPredicted RBP8.34□□□□□ -1.07
PKP4-201ENST00000389757 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 RHPN1-AS1Q9BWJ2 59 aa8.34□□□□□ -1.07
PKP4-201ENST00000389757 C7orf71A4D174 169 aa8.33□□□□□ -1.08
PKP4-201ENST00000389757 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
PKP4-201ENST00000389757 DUX4L9Q6RFH8 374 aaPredicted RBP8.33□□□□□ -1.08
PKP4-201ENST00000389757 ORMDL3Q8N138 153 aa8.33□□□□□ -1.08
PKP4-201ENST00000389757 RSPO3Q9BXY4 272 aaPredicted RBP8.33□□□□□ -1.08
PKP4-201ENST00000389757 DAZ1Q9NQZ3 744 aaKnown RBP8.33□□□□□ -1.08
PKP4-201ENST00000389757 IZUMO1RA6ND01 250 aa8.33□□□□□ -1.08
PKP4-201ENST00000389757 OVOL3O00110 214 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms