RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 COPS9Q8WXC6 57 aa15.17■□□□□ 0.02
SSC5D-201ENST00000389623 ARPC1AQ92747 370 aa15.17■□□□□ 0.02
SSC5D-201ENST00000389623 LINC00473A8K010 186 aa15.17■□□□□ 0.02
SSC5D-201ENST00000389623 TRAV3A0A0B4J244 114 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 E9PLN8 166 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 ZNF585BQ52M93 769 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 FAM169BQ8N8A8 192 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 ZNF883P0CG24 379 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 MEIG1Q5JSS6 88 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 VKORC1Q9BQB6 163 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 Q6P435 159 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 SFTA2Q6UW10 78 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 FOXL2NBQ6ZUU3 175 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 SIGMAR1Q99720 223 aa15.16■□□□□ 0.02
SSC5D-201ENST00000389623 hDV102S1A0JD36 115 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 COL6A6A6NMZ7 2263 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.02
SSC5D-201ENST00000389623 SELLP14151 372 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 ZFP36L1Q07352 338 aaKnown RBP15.15■□□□□ 0.02
SSC5D-201ENST00000389623 C20orf204Q6ZNR8 217 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 NUP35Q8NFH5 326 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 C8orf46Q8TAG6 207 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 ZNF479Q96JC4 524 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 ABCA4P78363 2273 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 CEACAM4O75871 244 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 BSPH1Q075Z2 132 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 Q5PR19 223 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 VCX2Q9H322 139 aa15.15■□□□□ 0.02
SSC5D-201ENST00000389623 NAA38Q9BRA0 125 aaKnown RBP15.14■□□□□ 0.01
SSC5D-201ENST00000389623 TMEM133Q9H2Q1 129 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 LILRA1O75019 489 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 SAMD5Q5TGI4 173 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 SCN5AQ14524 2016 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 PLCE1Q9P212 2302 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 IGKV1-6A0A0C4DH72 117 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 A0A1B0GUS0 222 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 TRGV3P03979 118 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 TGFAP01135 160 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 IGKV3-20P01619 116 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 Q0VG73 95 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 CLEC2AQ6UVW9 174 aa15.14■□□□□ 0.01
SSC5D-201ENST00000389623 PRR31Q5SQ13 230 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 SYS1-DBNDD2H3BUS1 97 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 NBR2O15453 112 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 SELENOKQ9Y6D0 94 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 PLXNA3P51805 1871 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 A0A087X0K7 114 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 IGHV1-18A0A0C4DH31 117 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 IL18BPO95998 194 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 TCRAP04437 139 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 SP9P0CG40 484 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 PAX9P55771 341 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 ERVK11-1P61568 191 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 ZCCHC24Q8N2G6 241 aaKnown RBP15.13■□□□□ 0.01
SSC5D-201ENST00000389623 MRAP2Q96G30 205 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 LIME1Q9H400 295 aa15.13■□□□□ 0.01
SSC5D-201ENST00000389623 LINC00205P59089 165 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 SNRPD3P62318 126 aaKnown RBP15.12■□□□□ 0.01
SSC5D-201ENST00000389623 DMRTC2Q8IXT2 367 aaPredicted RBP15.12■□□□□ 0.01
SSC5D-201ENST00000389623 A0A0G2JLM5 398 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 C9orf172C9J069 976 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 TSC2P49815 1807 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 IGKCP01834 107 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 GUSBP1Q15486 140 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 LY6EQ16553 131 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 FAM71F2Q6NXP2 309 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 METRNQ9UJH8 293 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 H7C1H1 209 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 DNAL4O96015 105 aa15.12■□□□□ 0.01
SSC5D-201ENST00000389623 PPIFP30405 207 aaKnown RBP15.12■□□□□ 0.01
SSC5D-201ENST00000389623 SRSF1Q07955 248 aaKnown RBP eCLIP15.12■□□□□ 0.01
SSC5D-201ENST00000389623 ZSWIM8A7E2V4 1837 aa15.11■□□□□ 0.01
SSC5D-201ENST00000389623 SLC50A1Q9BRV3 221 aa15.11■□□□□ 0.01
SSC5D-201ENST00000389623 SUMO2P61956 95 aaKnown RBP15.11■□□□□ 0.01
SSC5D-201ENST00000389623 LINC01560Q8TB33 94 aa15.11■□□□□ 0.01
SSC5D-201ENST00000389623 HS3ST6Q96QI5 342 aa15.11■□□□□ 0.01
SSC5D-201ENST00000389623 MRPS16Q9Y3D3 137 aaKnown RBP15.11■□□□□ 0.01
SSC5D-201ENST00000389623 UBE2L6O14933 153 aa15.11■□□□□ 0.01
SSC5D-201ENST00000389623 SPRR3Q9UBC9 169 aa15.11■□□□□ 0.01
SSC5D-201ENST00000389623 PMS2P5A8MQ11 134 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 TSPAN13O95857 204 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 NPIPB5A8MRT5 1133 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 CLEC19AQ6UXS0 136 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 CD177Q8N6Q3 437 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 IGHV3OR16-12A0A075B7B8 117 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 PRB3Q04118 309 aaPredicted RBP15.1■□□□□ 0.01
SSC5D-201ENST00000389623 IL15RAQ13261 267 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 LHFPL4Q7Z7J7 247 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 EXOC3-AS1Q8N2X6 119 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 USF3Q68DE3 2245 aa15.1■□□□□ 0.01
SSC5D-201ENST00000389623 TRAV8-2A0A0B4J237 113 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 UCNP55089 124 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 COX11Q9Y6N1 276 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 D6R8Y8 96 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 PSG1P11464 419 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 EVI2AP22794 236 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 CDKN1AP38936 164 aa15.09■□□□□ 0.01
SSC5D-201ENST00000389623 BCL6BQ8N143 479 aaPredicted RBP15.09■□□□□ 0.01
SSC5D-201ENST00000389623 C10orf126Q8N4M7 172 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms