RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 C5orf56Q8N8D9 126 aa19.82■□□□□ 0.76
SHOX2-201ENST00000389589 GNG7O60262 68 aa19.82■□□□□ 0.76
SHOX2-201ENST00000389589 TOMM40O96008 361 aa19.82■□□□□ 0.76
SHOX2-201ENST00000389589 IGHV4-38-2P0DP08 117 aa19.82■□□□□ 0.76
SHOX2-201ENST00000389589 MOB4Q9Y3A3 225 aa19.82■□□□□ 0.76
SHOX2-201ENST00000389589 TRBV20OR9-2A0A075B6H5 130 aa19.81■□□□□ 0.76
SHOX2-201ENST00000389589 A0A0U1RQK1 487 aa19.81■□□□□ 0.76
SHOX2-201ENST00000389589 CRYBB3P26998 211 aa19.81■□□□□ 0.76
SHOX2-201ENST00000389589 YPEL3P61236 119 aaPredicted RBP19.81■□□□□ 0.76
SHOX2-201ENST00000389589 C1QL4Q86Z23 238 aa19.81■□□□□ 0.76
SHOX2-201ENST00000389589 SSX3Q99909 188 aa19.81■□□□□ 0.76
SHOX2-201ENST00000389589 CXCL1P09341 107 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 RPL35P42766 123 aaKnown RBP19.8■□□□□ 0.76
SHOX2-201ENST00000389589 KLK9Q2XQG4 91 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 UNQ5815/PRO19632Q6UWF5 114 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 OR5B12Q96R08 314 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 C21orf62Q9NYP8 219 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 KLK9Q9UKQ9 250 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 CRYBG3Q68DQ2 2970 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 ANKRD17O75179 2603 aaKnown RBP19.8■□□□□ 0.76
SHOX2-201ENST00000389589 PPP1R2P9O14990 202 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 SCGB2A1O75556 95 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 LINC01356Q8N9X3 169 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 TCEAL7Q9BRU2 100 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 TMUB1Q9BVT8 246 aa19.8■□□□□ 0.76
SHOX2-201ENST00000389589 MRPL27Q9P0M9 148 aaKnown RBP19.8■□□□□ 0.76
SHOX2-201ENST00000389589 TGIF2-C20orf24A0A0A6YYL0 155 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 HELTA6NFD8 242 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 ATP6V0E1O15342 81 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 PIFOQ8TCI5 191 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 BEX4Q9NWD9 120 aaPredicted RBP19.79■□□□□ 0.76
SHOX2-201ENST00000389589 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHOX2-201ENST00000389589 NDUFB8O95169 186 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 S100PP25815 95 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 C2CD4CQ8TF44 421 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 TXN2Q99757 166 aa19.79■□□□□ 0.76
SHOX2-201ENST00000389589 TRBV24-1A0A075B6N3 115 aa19.78■□□□□ 0.76
SHOX2-201ENST00000389589 OR2J3O76001 311 aa19.78■□□□□ 0.76
SHOX2-201ENST00000389589 RPS10P46783 165 aaKnown RBP19.78■□□□□ 0.76
SHOX2-201ENST00000389589 OCC1Q8TAD7 63 aa19.78■□□□□ 0.76
SHOX2-201ENST00000389589 ELOVL1Q9BW60 279 aa19.78■□□□□ 0.76
SHOX2-201ENST00000389589 SLC25A39Q9BZJ4 359 aaPredicted RBP19.78■□□□□ 0.76
SHOX2-201ENST00000389589 A0A096LNT2 108 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 FCGR2BP31994 310 aaPredicted RBP19.77■□□□□ 0.76
SHOX2-201ENST00000389589 GALR1P47211 349 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 ECSCRQ19T08 205 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 Q56UQ5 140 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 S100A7AQ86SG5 101 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 ZFP82Q8N141 532 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 VN1R17PQ8TDU5 208 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 FBXL7Q9UJT9 491 aa19.77■□□□□ 0.76
SHOX2-201ENST00000389589 MDFIC2A0A1B0GVS7 189 aa19.77■□□□□ 0.75
SHOX2-201ENST00000389589 PGPEP1LA6NFU8 196 aa19.77■□□□□ 0.75
SHOX2-201ENST00000389589 PFN1P07737 140 aaKnown RBP19.77■□□□□ 0.75
SHOX2-201ENST00000389589 GP9P14770 177 aa19.77■□□□□ 0.75
SHOX2-201ENST00000389589 FAM210BQ96KR6 192 aa19.77■□□□□ 0.75
SHOX2-201ENST00000389589 TMEM14CQ9P0S9 112 aa19.77■□□□□ 0.75
SHOX2-201ENST00000389589 NBEAP1P0C6P0 100 aa19.76■□□□□ 0.75
SHOX2-201ENST00000389589 ZNF329Q86UD4 541 aa19.76■□□□□ 0.75
SHOX2-201ENST00000389589 TMEM219Q86XT9 240 aa19.76■□□□□ 0.75
SHOX2-201ENST00000389589 ZNF491Q8N8L2 437 aa19.76■□□□□ 0.75
SHOX2-201ENST00000389589 RNF125Q96EQ8 232 aa19.76■□□□□ 0.75
SHOX2-201ENST00000389589 AURKAIP1Q9NWT8 199 aaPredicted RBP19.76■□□□□ 0.75
SHOX2-201ENST00000389589 WI2-2373I1.2A0A1W2PRP0 233 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 F8W735 103 aaPredicted RBP19.75■□□□□ 0.75
SHOX2-201ENST00000389589 TGOLN2O43493 480 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 SRP14P37108 136 aaKnown RBP19.75■□□□□ 0.75
SHOX2-201ENST00000389589 GNG4P50150 75 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 SFRP2Q96HF1 295 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 BIN3Q9NQY0 253 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 S4R3C0 116 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 LRRC75A-AS1Q8N1F1 130 aa19.75■□□□□ 0.75
SHOX2-201ENST00000389589 VPS13CQ709C8 3753 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 J3QLI3 93 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 COL8A1P27658 744 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 MYCNOSP40205 109 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 SHANK2-AS3Q9BTD1 123 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 IL4P05112 153 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 LOXL1Q08397 574 aaPredicted RBP19.74■□□□□ 0.75
SHOX2-201ENST00000389589 CENPWQ5EE01 88 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 PYGO2Q9BRQ0 406 aa19.74■□□□□ 0.75
SHOX2-201ENST00000389589 KRTAP10-9P60411 292 aa19.73■□□□□ 0.75
SHOX2-201ENST00000389589 NECAP1Q8NC96 275 aa19.73■□□□□ 0.75
SHOX2-201ENST00000389589 IMMP2LQ96T52 175 aa19.73■□□□□ 0.75
SHOX2-201ENST00000389589 TRBV9A0A0B4J1U6 114 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 H3BRN7 92 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 TAS2R60P59551 318 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 DEFB113Q30KQ7 82 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 LEMD1Q68G75 181 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 KCNIP4Q6PIL6 250 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 ZNF600Q6ZNG1 722 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 BLNKQ8WV28 456 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 CRIP2P52943 208 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-201ENST00000389589 RANP62826 216 aaKnown RBP19.72■□□□□ 0.75
SHOX2-201ENST00000389589 TEX38Q6PEX7 206 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 RNF24Q9Y225 148 aa19.72■□□□□ 0.75
SHOX2-201ENST00000389589 SH2D7A6NKC9 451 aaPredicted RBP19.71■□□□□ 0.75
SHOX2-201ENST00000389589 AVPP01185 164 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 AMY1AP04745 511 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 HIST1H1EP10412 219 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms