RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CADP27708 2225 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 TIMM23O14925 209 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 IGKV1-16P04430 117 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV3OR16-8A0A075B7F1 116 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV2-26A0A0B4J1V2 119 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 CIDEAO60543 219 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 TFPI2P48307 235 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 EBLN2Q6P2I7 272 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 TRGV9Q99603 122 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV3-49A0A0A0MS15 119 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 A6NJY4 79 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 CHCHD1Q96BP2 118 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 CD24P25063 80 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 MLANAQ16655 118 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 FAM106AQ4KMX7 169 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 HIST1H4GQ99525 98 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 C2orf16Q68DN1 1984 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 SNAI2O43623 268 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 PSG1P11464 419 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 DOCK10Q96BY6 2186 aa13.18□□□□□ -0.3
PTPRN2-201ENST00000389413 VDAC2P45880 294 aaPredicted RBP13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 LHFPL4Q7Z7J7 247 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 VKORC1Q9BQB6 163 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 KLK15Q9H2R5 256 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 TRGV3P03979 118 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 WNT2P09544 360 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 LY6EQ16553 131 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 PIMREGQ9BSJ6 248 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 TCRAP04437 139 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 Q6ZS92 163 aa13.17□□□□□ -0.3
PTPRN2-201ENST00000389413 FABP5P3A8MUU1 101 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 M0R3E3 92 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 PDLIM4P50479 330 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 PLP1P60201 277 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 OR1N2Q8NGR9 330 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 ST6GALNAC3Q8NDV1 305 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV1-3A0A0C4DH29 117 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 TYMSP04818 313 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 OR5AN1Q8NGI8 311 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 PLA2G2EQ9NZK7 142 aa13.16□□□□□ -0.3
PTPRN2-201ENST00000389413 SH2D7A6NKC9 451 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV2-70P01814 119 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 CD33P20138 364 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 NUP35Q8NFH5 326 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 DCAF16Q9NXF7 216 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 ERASQ7Z444 233 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 NCOR1P1Q9H4R4 102 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV3OR16-10A0A075B7F0 116 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 ATP5LO75964 103 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 HIST1H1AQ02539 215 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
PTPRN2-201ENST00000389413 A0A1B0GWJ7 208 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 PMS2P5A8MQ11 134 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 C15orf65H3BRN8 121 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 ADIPOQQ15848 244 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 FAM71F2Q6NXP2 309 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 LURAP1LQ8IV03 231 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 RNF5Q99942 180 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 SCRT1Q9BWW7 348 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 NDUFS6O75380 124 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 KLF2Q9Y5W3 355 aaPredicted RBP13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 A0A0G2JNJ9 132 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 EXOC3-AS1Q8N2X6 119 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 Q9UFV3 132 aa13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
PTPRN2-201ENST00000389413 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 FAM181BA6NEQ2 426 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 GATA4P43694 442 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 ASCL2Q99929 193 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 MRPL27Q9P0M9 148 aaKnown RBP13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 A8MWP6 167 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 DYNLRB2Q8TF09 96 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 OR11H12B2RN74 326 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 M0R381 172 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 SMIM13P0DJ93 91 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 OR11H1Q8NG94 326 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 ATP5J2P56134 94 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 Q0VG73 95 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
PTPRN2-201ENST00000389413 ST20Q9HBF5 79 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms