RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 BORCS5Q969J3 196 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 PTH2Q96A98 100 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 AMELYQ99218 206 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 CMTM6Q9NX76 183 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 SLC35A3Q9Y2D2 325 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 SYNJ1O43426 1573 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 ANAPC1Q9H1A4 1944 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 MAP1AP78559 2803 aaPredicted RBP0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 TRAV12-1A0A0B4J245 112 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 INE1O15225 51 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 CRYZL1O95825 349 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 SULT1A1P50225 295 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 ALKAL1Q6UXT8 129 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 DEFB123Q8N688 67 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 DCUN1D1Q96GG9 259 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 WNK1Q9H4A3 2382 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 HS3ST2Q9Y278 367 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 CENPEQ02224 2701 aa0.51□□□□□ -2.33
RNU6-39P-201ENST00000384344 EXPH5Q8NEV8 1989 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 RALGAPA2Q2PPJ7 1873 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 MAST2Q6P0Q8 1798 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 STRCQ7RTU9 1775 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 MAP3K5Q99683 1374 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 EXOC1LA0A1B0GW35 172 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 SMIM23A6NLE4 172 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 M0R036 132 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 HIST1H1TP22492 207 aaPredicted RBP0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 YPEL3P61236 119 aaPredicted RBP0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 COTL1Q14019 142 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 MPV17LQ2QL34 196 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 TEX261Q6UWH6 196 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 PATE1Q8WXA2 126 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 GPR146Q96CH1 333 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 LLPHQ9BRT6 129 aaKnown RBP0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 CCDC90BQ9GZT6 254 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 C11orf68Q9H3H3 251 aaKnown RBP0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 OSTCQ9NRP0 149 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 TP73-AS1Q9UF72 201 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 U3KQ87 197 aa0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
RNU6-39P-201ENST00000384344 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 DMXL2Q8TDJ6 3036 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 SNAPC4Q5SXM2 1469 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 CECR2Q9BXF3 1484 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 A0A1W2PPM0 123 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 C7orf71A4D174 169 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 FAAHO00519 579 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 PIRO00625 290 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 NCR3O14931 201 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 HIST1H1EP10412 219 aaKnown RBP0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 CNBPP62633 177 aaKnown RBP0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 OR2F1Q13607 317 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 C8orf74Q6P047 294 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 SBSPONQ8IVN8 264 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 KRT222Q8N1A0 295 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 OR10J5Q8NHC4 309 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 TEX47Q8TBZ9 253 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 ITFG2Q969R8 447 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 C6orf62Q9GZU0 229 aaPredicted RBP0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 GUCA1BQ9UMX6 200 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 FRYLO94915 3013 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 DMXL1Q9Y485 3027 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.49□□□□□ -2.333e-57■■■■■ 58.3
RNU6-39P-201ENST00000384344 MUC3AQ02505 3323 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 LAMA1P25391 3075 aa0.49□□□□□ -2.33
RNU6-39P-201ENST00000384344 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 NUP155O75694 1391 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 MTUS2Q5JR59 1369 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 NBPF19A0A087WUL8 3843 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 CCDC160A6NGH7 325 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 LYZL6O75951 148 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 IFNA5P01569 189 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 RBP1P09455 135 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 RPL5P46777 297 aaKnown RBP0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 CDC42P60953 191 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 ACOT6Q3I5F7 207 aaPredicted RBP0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 C1orf137Q5JT78 98 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 FAM74A1Q5RGS3 127 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 SOSTDC1Q6X4U4 206 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 DEFB132Q7Z7B7 95 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 TMEM86BQ8N661 226 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 Q8N6K4 173 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 OR13D1Q8NGV5 346 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 PPP1R2P1Q96PQ5 205 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 C20orf27Q9GZN8 174 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 CDC42SE1Q9NRR8 79 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 VPS29Q9UBQ0 182 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 EPDR1Q9UM22 224 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 CICQ96RK0 1608 aaPredicted RBP0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 PCF11O94913 1555 aaKnown RBP0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 UTRNP46939 3433 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 KIF13BQ9NQT8 1826 aa0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
RNU6-39P-201ENST00000384344 FRYQ5TBA9 3013 aa0.47□□□□□ -2.33
RNU6-39P-201ENST00000384344 ZNF469Q96JG9 3925 aaPredicted RBP0.47□□□□□ -2.33
RNU6-39P-201ENST00000384344 OR4C46A6NHA9 309 aa0.47□□□□□ -2.33
RNU6-39P-201ENST00000384344 ZNF736B4DX44 427 aaPredicted RBP0.47□□□□□ -2.33
RNU6-39P-201ENST00000384344 BUB1B-PAK6H3BSN5 160 aa0.47□□□□□ -2.33
RNU6-39P-201ENST00000384344 ZNF25P17030 456 aaPredicted RBP0.47□□□□□ -2.33
RNU6-39P-201ENST00000384344 CASP1P29466 404 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms