RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CLEC7AQ9BXN2 247 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 RAB9BQ9NP90 201 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 TMEM178BH3BS89 294 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 MOSP00540 346 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 RBPJQ06330 500 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 Q6ZN92 141 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 BLNKQ8WV28 456 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 RITA1Q96K30 269 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 IGKV1D-37A0A075B6S9 117 aa13.08□□□□□ -0.31
NKX3-1-201ENST00000380871 IGHV3-21A0A0B4J1V1 117 aa13.08□□□□□ -0.31
NKX3-1-201ENST00000380871 DLL1O00548 723 aa13.08□□□□□ -0.31
NKX3-1-201ENST00000380871 PRB4P10163 310 aaPredicted RBP13.08□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF833PQ6ZTB9 187 aa13.08□□□□□ -0.31
NKX3-1-201ENST00000380871 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 K7ENP7 123 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 PEX7O00628 323 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 IGLC2P0DOY2 106 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 IGLC3P0DOY3 106 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 LRRC10Q5BKY1 277 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 C10orf113Q5VZT2 155 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 PNKDQ8N490 385 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 IGFBPL1Q8WX77 278 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 TXN2Q99757 166 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 M0QZ24 198 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 PRRX1P54821 245 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 KIR3DL3Q8N743 410 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 GAL3ST2Q9H3Q3 398 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 NCOR1P1Q9H4R4 102 aa13.08□□□□□ -0.32
NKX3-1-201ENST00000380871 RPL19P84098 196 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 PMCHL1Q16048 86 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 MBD6Q96DN6 1003 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 LINC00574Q9H8X3 128 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 LINC00312Q9Y6C7 94 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 ERHP84090 104 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 ZNF430Q9H8G1 570 aaPredicted RBP13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 CCL21O00585 134 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 APOA2P02652 100 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 ORM2P19652 201 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 FLYWCH2Q96CP2 140 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 C19orf24Q9BVV8 132 aa13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 MRPL32Q9BYC8 188 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-201ENST00000380871 FSTL3O95633 263 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 COX7A1P24310 79 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 C3orf36Q3SXR2 165 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 Q56UQ5 140 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 LEMD1Q68G75 181 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 HCP5Q6MZN7 132 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 EBLN2Q6P2I7 272 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 TCF24Q7RTU0 167 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 LINC00305Q7Z4B0 112 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 TEX36Q5VZQ5 186 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 LINC00322Q6ZN03 302 aaPredicted RBP13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 C11orf42Q8N5U0 333 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 OSR1Q8TAX0 266 aaPredicted RBP13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 BORCS7Q96B45 105 aa13.06□□□□□ -0.32
NKX3-1-201ENST00000380871 SHISA9B4DS77 424 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 NDUFB8O95169 186 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 CD3EP07766 207 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 MRPL52Q86TS9 123 aaKnown RBP13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 SLC25A17O43808 307 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 BTF3P20290 206 aaKnown RBP13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 HNRNPA3P51991 378 aaKnown RBP13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 COL5A1-AS1Q5SY13 56 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 OR5AN1Q8NGI8 311 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 SVEP1Q4LDE5 3571 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 A0A1W2PRD5 423 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 A0A1W2PRF3 423 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 A0A1W2PRM7 423 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 UQCR10Q9UDW1 63 aa13.05□□□□□ -0.32
NKX3-1-201ENST00000380871 IGHV1-69-2A0A0G2JMI3 117 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 TCRBV4S1A1TA0A5B7 111 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 C22orf46C9J442 243 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 HSBP1O75506 76 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 GSX1Q9H4S2 264 aaPredicted RBP13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 TNFRSF19Q9NS68 423 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 A0A1W2PPI3 338 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 CDSNQ15517 529 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 DCHS2Q6V1P9 2916 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 C7orf69Q9H7B7 122 aa13.04□□□□□ -0.32
NKX3-1-201ENST00000380871 FAM181BA6NEQ2 426 aa13.03□□□□□ -0.32
NKX3-1-201ENST00000380871 M0R2Z0 102 aa13.03□□□□□ -0.32
NKX3-1-201ENST00000380871 HINT1P49773 126 aaPredicted RBP13.03□□□□□ -0.32
NKX3-1-201ENST00000380871 GAGE1Q13065 139 aa13.03□□□□□ -0.32
NKX3-1-201ENST00000380871 LAMTOR2Q9Y2Q5 125 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms