RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 RAB40CQ96S21 281 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 BCL7BQ9BQE9 202 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 MCUBQ9NWR8 336 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 CLEC5AQ9NY25 188 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 RSL24D1Q9UHA3 163 aaKnown RBP12.5□□□□□ -0.41
HMGN1-204ENST00000380749 SHPKQ9UHJ6 478 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 PFDN2Q9UHV9 154 aa12.5□□□□□ -0.41
HMGN1-204ENST00000380749 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 BUB3O43684 328 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 LGI3Q8N145 548 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 PRR13Q9NZ81 148 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 HSPB7Q9UBY9 170 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 X6R8D5 127 aa12.49□□□□□ -0.41
HMGN1-204ENST00000380749 NOL3O60936 208 aaKnown RBP12.48□□□□□ -0.41
HMGN1-204ENST00000380749 AKR1C4P17516 323 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 Q6ZTC4 211 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 OR51G1Q8NGK1 321 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 DYNC2LI1Q8TCX1 351 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 RNF125Q96EQ8 232 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 APLNQ9ULZ1 77 aa12.48□□□□□ -0.41
HMGN1-204ENST00000380749 PSG1P11464 419 aa12.47□□□□□ -0.41
HMGN1-204ENST00000380749 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
HMGN1-204ENST00000380749 PBDC1Q9BVG4 233 aa12.47□□□□□ -0.41
HMGN1-204ENST00000380749 RBKSQ9H477 322 aa12.47□□□□□ -0.41
HMGN1-204ENST00000380749 ELOA3CA0A087WX78 387 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-204ENST00000380749 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 FABP1P07148 127 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 FAUP35544 74 aaKnown RBP12.46□□□□□ -0.41
HMGN1-204ENST00000380749 TMBIM6P55061 237 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 ATP5IP56385 69 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-204ENST00000380749 PRR20EP86478 221 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 PRR20CP86479 221 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 PRR20DP86480 221 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 PRR20BP86481 221 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 PRR20AP86496 221 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 KLF9Q13886 244 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-204ENST00000380749 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 OR1S1Q8NH92 325 aa12.46□□□□□ -0.41
HMGN1-204ENST00000380749 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
HMGN1-204ENST00000380749 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
HMGN1-204ENST00000380749 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-204ENST00000380749 LYZL2Q7Z4W2 148 aa12.45□□□□□ -0.42
HMGN1-204ENST00000380749 XCL2Q9UBD3 114 aa12.45□□□□□ -0.42
HMGN1-204ENST00000380749 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
HMGN1-204ENST00000380749 DUXBA0A1W2PPF3 345 aa12.44□□□□□ -0.42
HMGN1-204ENST00000380749 H3BMM0 161 aa12.44□□□□□ -0.42
HMGN1-204ENST00000380749 GPX4P36969 197 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-204ENST00000380749 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
HMGN1-204ENST00000380749 RNF126Q9BV68 326 aa12.44□□□□□ -0.42
HMGN1-204ENST00000380749 FABP12A6NFH5 140 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 ID1P41134 155 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 LYZP61626 148 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 CELA1Q9UNI1 258 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 AMBPP02760 352 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 AP3S2P59780 193 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 RAB11AP62491 216 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 GAMTQ14353 236 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 TMED4Q7Z7H5 227 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
HMGN1-204ENST00000380749 SLIRPQ9GZT3 109 aaKnown RBP12.43□□□□□ -0.42
HMGN1-204ENST00000380749 DEFB131BA0A096LNP1 70 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 TNFSF8P32971 234 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 PSMB3P49720 205 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 ZNF90Q03938 601 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 C1orf194Q5T5A4 169 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 FOXI2Q6ZQN5 318 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 MCFD2Q8NI22 146 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 LINC00052Q96N35 136 aa12.42□□□□□ -0.42
HMGN1-204ENST00000380749 DYNC1H1Q14204 4646 aaKnown RBP12.41□□□□□ -0.42
HMGN1-204ENST00000380749 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 SNRPGP15A8MWD9 76 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 H3BMQ9 156 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 SAMD13Q5VXD3 122 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 ZNF767PQ75MW2 155 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 SOSTQ9BQB4 213 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 SAV1Q9H4B6 383 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-204ENST00000380749 PAIP2BQ9ULR5 123 aaKnown RBP12.41□□□□□ -0.42
HMGN1-204ENST00000380749 DNAH11Q96DT5 4516 aa12.41□□□□□ -0.42
HMGN1-204ENST00000380749 TMEM189A5PLL7 270 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 MED6O75586 246 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 IAPPP10997 89 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 VAMP1P23763 118 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 C12orf74Q32Q52 190 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 ZNF705AQ6ZN79 300 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-204ENST00000380749 CIB3Q96Q77 187 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-204ENST00000380749 NEU1Q99519 415 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 TRGV9Q99603 122 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 NDUFAF3Q9BU61 184 aa12.4□□□□□ -0.42
HMGN1-204ENST00000380749 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
HMGN1-204ENST00000380749 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 PITX3O75364 302 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms