RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SMIM9A6NGZ8 99 aa12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 RGS21Q2M5E4 152 aa12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 RNF212Q495C1 297 aa12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 PBDC1Q9BVG4 233 aa12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 SCPEP1Q9HB40 452 aa12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 YTHDF2Q9Y5A9 579 aaKnown RBP12.62□□□□□ -0.39
PDLIM4-202ENST00000379018 TEX48A0A1B0GUV7 120 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 LOC102723971A0A1B0GUV8 181 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 CEBPZOSA8MTT3 80 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 HTR2BP41595 481 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 SPCS3P61009 180 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 YPEL3P61236 119 aaPredicted RBP12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 DAD1P61803 113 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 BSXQ3C1V8 233 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 CCDC190Q86UF4 302 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 OR51G1Q8NGK1 321 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 COQ8AQ8NI60 647 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 NPIPB3Q92617 1050 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 SLC35B3Q9H1N7 401 aa12.61□□□□□ -0.39
PDLIM4-202ENST00000379018 BUB3O43684 328 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 HBE1P02100 147 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 RD3LP0DJH9 198 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 SLC25A4P12235 298 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 S100A5P33763 92 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 OXA1LQ15070 435 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 RNASE10Q5GAN6 216 aaKnown RBP12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 GOLT1BQ9Y3E0 138 aa12.6□□□□□ -0.39
PDLIM4-202ENST00000379018 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 TOMM40O96008 361 aa12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 RORCP51449 518 aa12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 ZNF709Q8N972 641 aa12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 SAV1Q9H4B6 383 aaPredicted RBP12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 SEPSECSQ9HD40 501 aaKnown RBP12.59□□□□□ -0.39
PDLIM4-202ENST00000379018 F6UB75 175 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 UPK1BO75841 260 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 CDK2AP2O75956 126 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 PSG1P11464 419 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 ID1P41134 155 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 SCGB2B2Q4G0G5 96 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 C2orf83Q53S99 150 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 FOXI2Q6ZQN5 318 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 OR13C8Q8NGS7 320 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 RNASEH2CQ8TDP1 164 aaKnown RBP12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 AP3S1Q92572 193 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 CACNG5Q9UF02 275 aa12.58□□□□□ -0.4
PDLIM4-202ENST00000379018 HPGDSO60760 199 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 APOA1P02647 267 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 CD3DP04234 171 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 OR5AC1P0C628 307 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 UCP1P25874 307 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 ETFRF1Q6IPR1 90 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 RNF125Q96EQ8 232 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 TMEM208Q9BTX3 173 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 KLK11Q9UBX7 282 aa12.57□□□□□ -0.4
PDLIM4-202ENST00000379018 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 ELK1P19419 428 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 PSG9Q00887 426 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 MEF2DQ14814 521 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 SPANXN2Q5MJ10 180 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 FAM78BQ5VT40 261 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 C1orf158Q8N1D5 194 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 OR4D10Q8NGI6 311 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 ZFAND1Q8TCF1 268 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 MARCH1Q8TCQ1 289 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 TMEM170AQ8WVE7 144 aa12.56□□□□□ -0.4
PDLIM4-202ENST00000379018 NUDT3O95989 172 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 PTTG1O95997 202 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 EBLN2Q6P2I7 272 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 C6orf223Q8N319 242 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 LHFPL5Q8TAF8 219 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 LRP1BQ9NZR2 4599 aa12.55□□□□□ -0.4
PDLIM4-202ENST00000379018 TEX13DA0A0J9YY54 714 aaPredicted RBP12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 NBDYA0A0U1RRE5 68 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 PRM2P04554 102 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 PSMB3P49720 205 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 LYZP61626 148 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 FAM219AQ8IW50 185 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 OR52I2Q8NH67 350 aa12.54□□□□□ -0.4
PDLIM4-202ENST00000379018 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 IFITM3Q01628 133 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms