RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ZNF785A8K8V0 405 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 GIPP09681 153 aaPredicted RBP14.13□□□□□ -0.15
SSU72-203ENST00000378725 GP9P14770 177 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 VWC2Q2TAL6 325 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 BTNL8Q6UX41 500 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 STX12Q86Y82 276 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 RHPN1-AS1Q9BWJ2 59 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 LSM4Q9Y4Z0 139 aaKnown RBP14.13□□□□□ -0.15
SSU72-203ENST00000378725 U3KQE9 123 aa14.13□□□□□ -0.15
SSU72-203ENST00000378725 TRAV25A0A0B4J276 109 aa14.12□□□□□ -0.15
SSU72-203ENST00000378725 SMCO3A2RU48 225 aa14.12□□□□□ -0.15
SSU72-203ENST00000378725 CFDP00746 253 aaPredicted RBP14.12□□□□□ -0.15
SSU72-203ENST00000378725 APOHP02749 345 aaPredicted RBP14.12□□□□□ -0.15
SSU72-203ENST00000378725 IL4P05112 153 aa14.12□□□□□ -0.15
SSU72-203ENST00000378725 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.152e-7■■□□□ 11.9
SSU72-203ENST00000378725 NHLH2Q02577 135 aa14.12□□□□□ -0.15
SSU72-203ENST00000378725 USF2Q15853 346 aaPredicted RBP14.12□□□□□ -0.15
SSU72-203ENST00000378725 TMEM217Q8N7C4 229 aa14.12□□□□□ -0.15
SSU72-203ENST00000378725 METTL26Q96S19 204 aa14.12□□□□□ -0.15
SSU72-203ENST00000378725 IGHV3-49A0A0A0MS15 119 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 HBG1P69891 147 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 HBG2P69892 147 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 ATP6V1FQ16864 119 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 TEPPQ6URK8 271 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 TMEM182Q6ZP80 229 aaPredicted RBP14.11□□□□□ -0.15
SSU72-203ENST00000378725 TMEM61Q8N0U2 210 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 RNF125Q96EQ8 232 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 PRR25Q96S07 402 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 MBD2Q9UBB5 411 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 NOTCH1P46531 2555 aa14.11□□□□□ -0.15
SSU72-203ENST00000378725 K7EIL1 84 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 HNRNPCP07910 306 aaKnown RBP eCLIP14.1□□□□□ -0.153e-8■■■□□ 15.9
SSU72-203ENST00000378725 BMI1P35226 326 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 RAP2BP61225 183 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 BAXQ07812 192 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 FGL1Q08830 312 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 OR2F1Q13607 317 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 FAM90A2PQ658T7 463 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 CYP2G1PQ6ZSU1 146 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 LILRB2Q8N423 598 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 THAP6Q8TBB0 222 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 ST8SIA2Q92186 375 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 RNF2Q99496 336 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 UQCC1Q9NVA1 299 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 SELENOKQ9Y6D0 94 aa14.1□□□□□ -0.15
SSU72-203ENST00000378725 A0A1W2PS18 150 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 TSPAN4O14817 238 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 SELENOTP62341 195 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 Q5BKY6 102 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 LAMTOR1Q6IAA8 161 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 RBPMS2Q6ZRY4 209 aaKnown RBP14.09□□□□□ -0.15
SSU72-203ENST00000378725 TMEM147Q9BVK8 224 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 RABAC1Q9UI14 185 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 WDR83OSQ9Y284 106 aa14.09□□□□□ -0.15
SSU72-203ENST00000378725 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 CD5P06127 495 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 GATA2P23769 480 aaPredicted RBP14.08□□□□□ -0.16
SSU72-203ENST00000378725 RPL12P30050 165 aaKnown RBP14.08□□□□□ -0.16
SSU72-203ENST00000378725 Q6ZNX1 250 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 Q8N1Y9 231 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 BPIFCQ8NFQ6 507 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 CHAC2Q8WUX2 184 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 SLC45A2Q9UMX9 530 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 DNAH3Q8TD57 4116 aa14.08□□□□□ -0.16
SSU72-203ENST00000378725 EIF2B2P49770 351 aaKnown RBP14.07□□□□□ -0.16
SSU72-203ENST00000378725 PLP1P60201 277 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 LYZP61626 148 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 GUCA2BQ16661 112 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 OR5C1Q8NGR4 320 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 NARS2Q96I59 477 aaKnown RBP14.07□□□□□ -0.16
SSU72-203ENST00000378725 MGST2Q99735 147 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 HSPB11Q9Y547 144 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 MEGF8Q7Z7M0 2845 aa14.07□□□□□ -0.16
SSU72-203ENST00000378725 IGHV3-66A0A0C4DH42 116 aa14.06□□□□□ -0.16
SSU72-203ENST00000378725 AGPAT2O15120 278 aa14.06□□□□□ -0.16
SSU72-203ENST00000378725 BUB3O43684 328 aa14.06□□□□□ -0.16
SSU72-203ENST00000378725 C16orf54Q6UWD8 224 aa14.06□□□□□ -0.16
SSU72-203ENST00000378725 STPG3Q8N7X2 389 aa14.06□□□□□ -0.16
SSU72-203ENST00000378725 SPAG8Q99932 426 aaPredicted RBP14.06□□□□□ -0.16
SSU72-203ENST00000378725 PBDC1Q9BVG4 233 aa14.06□□□□□ -0.16
SSU72-203ENST00000378725 DFFBO76075 338 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 RAB31Q13636 194 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 TCF24Q7RTU0 167 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 ZNF546Q86UE3 836 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 OR2T35Q8NGX2 323 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 GLMPQ8WWB7 406 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 GRAMD2BQ96HH9 432 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 PFDN2Q9UHV9 154 aa14.05□□□□□ -0.16
SSU72-203ENST00000378725 MPDU1O75352 247 aa14.04□□□□□ -0.16
SSU72-203ENST00000378725 LINC00869P0C866 280 aa14.04□□□□□ -0.16
SSU72-203ENST00000378725 NUP62P37198 522 aaPredicted RBP14.04□□□□□ -0.16
SSU72-203ENST00000378725 CAMLGP49069 296 aa14.04□□□□□ -0.16
SSU72-203ENST00000378725 UBE2L5PA0A1B0GUS4 154 aa14.03□□□□□ -0.16
SSU72-203ENST00000378725 G3V3Q6 166 aa14.03□□□□□ -0.16
SSU72-203ENST00000378725 ORM2P19652 201 aa14.03□□□□□ -0.16
SSU72-203ENST00000378725 CLINT1Q14677 625 aa14.03□□□□□ -0.16
SSU72-203ENST00000378725 C1orf194Q5T5A4 169 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms