RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 CRYGBP07316 175 aa15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 SRIP30626 198 aa15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 RPL27AP46776 148 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 LGALS7P47929 136 aa15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 RPL19P84098 196 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 PVRIGQ6DKI7 326 aa15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 ZNF705AQ6ZN79 300 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 FAM103A1Q9BTL3 118 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 BLNKQ8WV28 456 aa15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 C7orf69Q9H7B7 122 aa15.62■□□□□ 0.09
SHROOM1-202ENST00000378676 HLA-DQA1P01909 254 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 COX19Q49B96 90 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 PRR27Q6MZM9 219 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 TEX45Q8NA69 505 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 SGK494Q96LW2 274 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 MIEN1Q9BRT3 115 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 IGLV1-47P01700 117 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 GPX1P07203 203 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 OR10J3Q5JRS4 329 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 FAM231DQ6ZW35 169 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 SSX8Q7RTT4 187 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 NUDT10Q8NFP7 164 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 VN1R17PQ8TDU5 208 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 PERPQ96FX8 193 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 NUDT11Q96G61 164 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 GSX1Q9H4S2 264 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 MSRB2Q9Y3D2 182 aa15.61■□□□□ 0.09
SHROOM1-202ENST00000378676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 CORTO00230 105 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 BRS3P32247 399 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 SLAQ13239 276 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 TBR1Q16650 682 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 KCNS1Q96KK3 526 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 LPAR2Q9HBW0 351 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 NGBQ9NPG2 151 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 A6NNC1 897 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 APOBEC3AP31941 199 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 TRGV9Q99603 122 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 RPH3ALQ9UNE2 315 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 SIGLEC9Q9Y336 463 aa15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 TBL2Q9Y4P3 447 aaKnown RBP15.6■□□□□ 0.09
SHROOM1-202ENST00000378676 IGHV1-3A0A0C4DH29 117 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 ZNF253O75346 499 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 GDF5OSQ5U4N7 250 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 ETFRF1Q6IPR1 90 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 SPACA3Q8IXA5 215 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 SIGLECL1Q8N7X8 197 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 Q8N976 141 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 ZZEF1O43149 2961 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 TLN1Q9Y490 2541 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 CEP295Q9C0D2 2601 aa15.59■□□□□ 0.09
SHROOM1-202ENST00000378676 A0A1W2PS18 150 aa15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 H3BTX0 84 aa15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 APCSP02743 223 aa15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 SLC25A5P05141 298 aaKnown RBP15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 PMCHP20382 165 aa15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 GRAMD2BQ96HH9 432 aa15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 RALYQ9UKM9 306 aaKnown RBP15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 EPDR1Q9UM22 224 aa15.58■□□□□ 0.09
SHROOM1-202ENST00000378676 TEX22C9J3V5 150 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 AMTP48728 403 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 TMEM183BQ1AE95 376 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 LEMD1Q68G75 181 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 NUP35Q8NFH5 326 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 ZNF331Q9NQX6 463 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 PAM16Q9Y3D7 125 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 DCHS2Q6V1P9 2916 aa15.58■□□□□ 0.08
SHROOM1-202ENST00000378676 PGPA6NDG6 321 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 CD3EP07766 207 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 GP9P14770 177 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 COX7A1P24310 79 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 TMEM116Q8NCL8 245 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 NRN1Q9NPD7 142 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 ABCA1O95477 2261 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 TACC2O95359 2948 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 B9A039 149 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 BUB1B-PAK6H3BSN5 160 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 FAM87AP0C7U9 286 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 KRTDAPP60985 99 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 UBE2G1P62253 170 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 TNFRSF14Q92956 283 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 INSIG2Q9Y5U4 225 aa15.57■□□□□ 0.08
SHROOM1-202ENST00000378676 WIPF2Q8TF74 440 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 CLEC7AQ9BXN2 247 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 FBXL15Q9H469 300 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 LRBAP50851 2863 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 PRRX1P54821 245 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 LINC01560Q8TB33 94 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 C22orf15Q8WYQ4 148 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 ZNF586Q9NXT0 402 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 F11RQ9Y624 299 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 ARHGAP32A7KAX9 2087 aa15.56■□□□□ 0.08
SHROOM1-202ENST00000378676 VWC2LB2RUY7 222 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 HYPMO75409 117 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 NBEAP1P0C6P0 100 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 PPP1R27Q86WC6 154 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 STXBP6Q8NFX7 210 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 ZNF324O75467 553 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 PRR31Q5SQ13 230 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 DMRTA1Q5VZB9 504 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms