RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SORL1Q92673 2214 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 IGKV1OR2-108A0A075B7D4 117 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 K7EIL1 84 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 MPC2O95563 127 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 IL4P05112 153 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 CXCL3P19876 107 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 S100A11P31949 105 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 HBG1P69891 147 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 HBG2P69892 147 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 FCN2Q15485 313 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 RBPMS2Q6ZRY4 209 aaKnown RBP9.99□□□□□ -0.81
CKAP2-202ENST00000378034 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
CKAP2-202ENST00000378034 SMCO3A2RU48 225 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 IZUMO1RA6ND01 250 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 ZNF785A8K8V0 405 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
CKAP2-202ENST00000378034 RRAS2P62070 204 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-202ENST00000378034 ZNF90Q03938 601 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 SLC38A11Q08AI6 406 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 ARL16Q0P5N6 197 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 TMEM61Q8N0U2 210 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 OR11H7Q8NGC8 314 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 MRAPQ8TCY5 172 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 OR5AC2Q9NZP5 309 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 PFDN2Q9UHV9 154 aa9.98□□□□□ -0.81
CKAP2-202ENST00000378034 IGSF23A1L1A6 192 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 H0YIZ8 118 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 CST7O76096 145 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 NUP62P37198 522 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-202ENST00000378034 ATP6V1FQ16864 119 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 TEPPQ6URK8 271 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 RNF125Q96EQ8 232 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 GRAMD2BQ96HH9 432 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 RABAC1Q9UI14 185 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 U3KQE9 123 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 TSPAN4O14817 238 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 SELENOTP62341 195 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 BAXQ07812 192 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 GTSCR1Q86UQ5 136 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 BPIFCQ8NFQ6 507 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 WDR89Q96FK6 387 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-202ENST00000378034 SPAG8Q99932 426 aaPredicted RBP9.97□□□□□ -0.81
CKAP2-202ENST00000378034 RNF126Q9BV68 326 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
CKAP2-202ENST00000378034 USF2Q15853 346 aaPredicted RBP9.96□□□□□ -0.81
CKAP2-202ENST00000378034 GUCA2BQ16661 112 aa9.96□□□□□ -0.81
CKAP2-202ENST00000378034 VWC2Q2TAL6 325 aa9.96□□□□□ -0.81
CKAP2-202ENST00000378034 LILRB2Q8N423 598 aa9.96□□□□□ -0.81
CKAP2-202ENST00000378034 ST8SIA2Q92186 375 aa9.96□□□□□ -0.81
CKAP2-202ENST00000378034 RNF2Q99496 336 aa9.96□□□□□ -0.81
CKAP2-202ENST00000378034 LSM4Q9Y4Z0 139 aaKnown RBP9.96□□□□□ -0.81
CKAP2-202ENST00000378034 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 APOHP02749 345 aaPredicted RBP9.95□□□□□ -0.82
CKAP2-202ENST00000378034 GIPP09681 153 aaPredicted RBP9.95□□□□□ -0.82
CKAP2-202ENST00000378034 LYL1P12980 280 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 S100A7P31151 101 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 EIF2B2P49770 351 aaKnown RBP9.95□□□□□ -0.82
CKAP2-202ENST00000378034 FGL1Q08830 312 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 CYP2G1PQ6ZSU1 146 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 TMEM217Q8N7C4 229 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 THAP6Q8TBB0 222 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 TMEM147Q9BVK8 224 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 UQCC1Q9NVA1 299 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 SLC45A2Q9UMX9 530 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 EWSR1Q01844 656 aaKnown RBP eCLIP9.95□□□□□ -0.82
CKAP2-202ENST00000378034 OR2F1Q13607 317 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 RAB31Q13636 194 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 FAM90A2PQ658T7 463 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 SMAD5-AS1Q9Y6J3 95 aa9.95□□□□□ -0.82
CKAP2-202ENST00000378034 IGHV3OR16-13A0A075B7E8 117 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 IGHV3-74A0A0B4J1X5 117 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 RAP2BP61225 183 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 LYZP61626 148 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 DEFB121Q5J5C9 76 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 TCF24Q7RTU0 167 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 ZNF546Q86UE3 836 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 Q8N1Y9 231 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 NEURL2Q9BR09 285 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 PBDC1Q9BVG4 233 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 OR4C46A6NHA9 309 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 PLP1P60201 277 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 PAFAH1B2P68402 229 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 NHLH2Q02577 135 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 PXDC1Q5TGL8 231 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 C16orf54Q6UWD8 224 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 WDR83OSQ9Y284 106 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 SELENOKQ9Y6D0 94 aa9.94□□□□□ -0.82
CKAP2-202ENST00000378034 TRAV2A0A0B4J234 112 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 HELTA6NFD8 242 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 BOLA2-SMG1P6H3BVE0 249 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 BUB3O43684 328 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 MPDU1O75352 247 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 DFFBO76075 338 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 RPL12P30050 165 aaKnown RBP9.93□□□□□ -0.82
CKAP2-202ENST00000378034 AP2S1P53680 142 aaPredicted RBP9.93□□□□□ -0.82
CKAP2-202ENST00000378034 CD81P60033 236 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 C1orf194Q5T5A4 169 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 S100A7AQ86SG5 101 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms