RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ESDP10768 282 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 CD33P20138 364 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 ZNF114Q8NC26 417 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 FDCSPQ8NFU4 85 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 TMEM133Q9H2Q1 129 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 IGKV1D-17A0A075B6S4 117 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
PCDH9-202ENST00000377865 KLF5Q13887 457 aaPredicted RBP7.18□□□□□ -1.26
PCDH9-202ENST00000377865 SLC50A1Q9BRV3 221 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 TRAV8-6A0A0B4J262 113 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 FABP5P3A8MUU1 101 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 TMPRSS3P57727 454 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 CYYR1Q96J86 154 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 MUC22E2RYF6 1773 aaPredicted RBP7.17□□□□□ -1.26
PCDH9-202ENST00000377865 IGHV1-46P01743 117 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 Q86TA4 180 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 MPDZO75970 2070 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 J3KRW8 73 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 APOBEC3AP31941 199 aaPredicted RBP7.17□□□□□ -1.26
PCDH9-202ENST00000377865 YPEL4Q96NS1 127 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 GAFA1Q96PS6 74 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 SCGB3A1Q96QR1 104 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 RNF5Q99942 180 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 MUC21A0A0G2JKD1 596 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 MUC21A0A140T8X8 626 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 SP9P0CG40 484 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 PSG1P11464 419 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 RIPPLY3P57055 190 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 ATP5G2Q06055 141 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 PAPPA-AS1Q5QFB9 102 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 MUC21Q5SSG8 566 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 PPP1R27Q86WC6 154 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
PCDH9-202ENST00000377865 FTH1P19P0C7X4 201 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 CCL3L1P16619 93 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 COPS9Q8WXC6 57 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 DPM3Q9P2X0 92 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 LOC105371242A0A075B767 164 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 IGKV3-15P01624 115 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 NPPCP23582 126 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 WDR86Q86TI4 376 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 H3BRM9 83 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 NBR2O15453 112 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 DKK1O94907 266 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 SRSF1Q07955 248 aaKnown RBP eCLIP7.16□□□□□ -1.26
PCDH9-202ENST00000377865 GUSBP1Q15486 140 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 PRSS8Q16651 343 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 FAM57AQ8TBR7 257 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 SNRNP200O75643 2136 aaKnown RBP7.16□□□□□ -1.26
PCDH9-202ENST00000377865 LINC01549A6NIU2 74 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 K7EN84 100 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 PSG3Q16557 428 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 SRSF8Q9BRL6 282 aaKnown RBP7.16□□□□□ -1.26
PCDH9-202ENST00000377865 CST9LQ9H4G1 147 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 A0A087X0K7 114 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 ASIPP42127 132 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 KIR2DL4Q99706 377 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 NHP2Q9NX24 153 aaKnown RBP7.16□□□□□ -1.26
PCDH9-202ENST00000377865 RAXQ9Y2V3 346 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 SLC25A15Q9Y619 301 aa7.16□□□□□ -1.26
PCDH9-202ENST00000377865 GAGE12BA1L429 117 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 D6R8Y8 96 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 SMAD7O15105 426 aaKnown RBP7.15□□□□□ -1.26
PCDH9-202ENST00000377865 UNQ6494/PRO21346Q6UXR6 183 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 ZCCHC24Q8N2G6 241 aaKnown RBP7.15□□□□□ -1.26
PCDH9-202ENST00000377865 TMEM131Q92545 1883 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 C15orf65H3BRN8 121 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 HAX1O00165 279 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 LOXL3P58215 753 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 RNFT1Q5M7Z0 435 aa7.15□□□□□ -1.26
PCDH9-202ENST00000377865 SPAARA0A1B0GVQ0 90 aa7.15□□□□□ -1.27
PCDH9-202ENST00000377865 C3orf36Q3SXR2 165 aa7.15□□□□□ -1.27
PCDH9-202ENST00000377865 ORMDL2Q53FV1 153 aa7.15□□□□□ -1.27
PCDH9-202ENST00000377865 TM4SF20Q53R12 229 aa7.15□□□□□ -1.27
PCDH9-202ENST00000377865 NUP37Q8NFH4 326 aa7.15□□□□□ -1.27
PCDH9-202ENST00000377865 GGTLC3B5MD39 225 aa7.15□□□□□ -1.27
PCDH9-202ENST00000377865 PAX1P15863 534 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 PRR20EP86478 221 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 PRR20CP86479 221 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 PRR20DP86480 221 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 PRR20BP86481 221 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 PRR20AP86496 221 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 KIR3DS1Q14943 382 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 TTC32Q5I0X7 151 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 NOTCH4Q99466 2003 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 IGHG3P01860 377 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 LINC00205P59089 165 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 PAX2Q02962 417 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 SLAQ13239 276 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF479Q96JC4 524 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF256Q9Y2P7 627 aaPredicted RBP7.14□□□□□ -1.27
PCDH9-202ENST00000377865 MYOD1P15172 320 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 BSPH1Q075Z2 132 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 LY6G6EA0A0G2JKS1 128 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms