RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TNCP24821 2201 aa12.65□□□□□ -0.38
CSNK1A1-202ENST00000377843 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-202ENST00000377843 ACP1P24666 158 aa12.65□□□□□ -0.38
CSNK1A1-202ENST00000377843 MYCNOSP40205 109 aa12.65□□□□□ -0.38
CSNK1A1-202ENST00000377843 TM4SF20Q53R12 229 aa12.65□□□□□ -0.38
CSNK1A1-202ENST00000377843 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.38
CSNK1A1-202ENST00000377843 C19orf71A6NCJ1 209 aa12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 FSTL3O95633 263 aa12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 APOHP02749 345 aaPredicted RBP12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 SCGB1A1P11684 91 aa12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 LOXL1Q08397 574 aaPredicted RBP12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 TMEM177Q53S58 311 aa12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 ATP6V0BQ99437 205 aa12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 ARRDC1-AS1Q9H2J1 176 aa12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 TSSC4Q9Y5U2 329 aaPredicted RBP12.65□□□□□ -0.39
CSNK1A1-202ENST00000377843 A0A096LNJ9 63 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 SPAARA0A1B0GVQ0 90 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 A8MWL6 223 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 CHEK1O14757 476 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 OR10W1Q8NGF6 305 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 ADTRPQ96IZ2 230 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 HES7Q9BYE0 225 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
CSNK1A1-202ENST00000377843 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 SMAD7O15105 426 aaKnown RBP12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 IGHV3-48P01763 117 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 CCL4P13236 92 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 FCGR2BP31994 310 aaPredicted RBP12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 TBC1D28Q2M2D7 210 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 RBPMS2Q6ZRY4 209 aaKnown RBP12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 GPR82Q96P67 336 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 JPT1Q9UK76 154 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 ZNF257Q9Y2Q1 563 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 A1L4Q6 167 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 P01737 135 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 CEACAM3P40198 252 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 PRCDQ00LT1 54 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 OR8A1Q8NGG7 326 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 SH3BGRL2Q9UJC5 107 aa12.63□□□□□ -0.39
CSNK1A1-202ENST00000377843 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 CD69Q07108 199 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 CCDC144NLQ6NUI1 221 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 A0A1B0GV72 72 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 COX7A2P2O60397 106 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 RAB9AP51151 201 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 DUSP23Q9BVJ7 150 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 KLF12Q9Y4X4 402 aa12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 SOX21Q9Y651 276 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-202ENST00000377843 TEX50A0A1B0GTY4 177 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 GAGE12HA6NDE8 117 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 FABP2P12104 132 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 KIR2DS2P43631 304 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 PSG3Q16557 428 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 CT45A1Q5HYN5 189 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 ZNF788Q6ZQV5 615 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 CT45A3Q8NHU0 189 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 FZR1Q9UM11 496 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 F11RQ9Y624 299 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 PGPA6NDG6 321 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 C10orf113Q5VZT2 155 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 PPP1R32Q7Z5V6 425 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 KLF14Q8TD94 323 aaPredicted RBP12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 ZNF714Q96N38 554 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 KNTC1P50748 2209 aa12.61□□□□□ -0.39
CSNK1A1-202ENST00000377843 H3BTX0 84 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 NKX2-8O15522 239 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 PRDX2P32119 198 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 FXYD7P58549 80 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 CT83Q5H943 113 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 DPF1Q92782 380 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 K7ERJ3 54 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 MAGEA5P43359 124 aa12.6□□□□□ -0.39
CSNK1A1-202ENST00000377843 AHCTF1Q8WYP5 2266 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 C22orf46C9J442 243 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 UPK2O00526 184 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 CYB561P49447 251 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 OR2Z1Q8NG97 314 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 IGKV1D-17A0A075B6S4 117 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 HAX1O00165 279 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 LTAP01374 205 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 FXYD2P54710 66 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 CACNG7P62955 275 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 CR1LQ2VPA4 569 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 ZADH2Q8N4Q0 377 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 OR9G4Q8NGQ1 327 aa12.59□□□□□ -0.39
CSNK1A1-202ENST00000377843 MRPL36Q9P0J6 103 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms