RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 KIR2DL5BA0A0G2JN68 375 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 KIR2DL5BA0A0G2JPC4 375 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 MPTX1A8MV57 137 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 UBE2CO00762 179 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 SSSCA1O60232 199 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 ZNF688P0C7X2 276 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 LYZP61626 148 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 ZNF90Q03938 601 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 OR2F1Q13607 317 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 STHQ8IWL8 128 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 KIR2DL5AQ8N109 375 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 KIR2DL5BQ8NHK3 375 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 PPP1R14BQ96C90 147 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 RNF125Q96EQ8 232 aa8.55□□□□□ -1.04
SMARCE1-203ENST00000377808 TRAV6A0A075B6T7 132 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 TRAV2A0A0B4J234 112 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 SMCO3A2RU48 225 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 HELTA6NFD8 242 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 CA1P00915 261 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 FABP1P07148 127 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 NKX2-1P43699 371 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 POLR2GP62487 172 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 AKR1C1Q04828 323 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 Q6ZWC4 215 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 CSTL1Q9H114 145 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 GSKIPQ9P0R6 139 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 STRAPQ9Y3F4 350 aaKnown RBP8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 K7EQG2 157 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 PLA2G10O15496 165 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 AP2S1P53680 142 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 IAH1Q2TAA2 248 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 CNPY1Q3B7I2 92 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 SIGLEC15Q6ZMC9 328 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 GLMPQ8WWB7 406 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 PSENENQ9NZ42 101 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 PFDN2Q9UHV9 154 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 U3KQE9 123 aa8.54□□□□□ -1.04
SMARCE1-203ENST00000377808 IGKV1D-37A0A075B6S9 117 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 A0A0J9YWU9 116 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 SNRPGP15A8MWD9 76 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 FAM25EA8MYX2 175 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 TCRBP04435 133 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 NUP62P37198 522 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 PMS2P11Q13670 270 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 PSMG4Q5JS54 123 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 OR8G2PQ6IF36 304 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 ACOT7LQ6ZUV0 252 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 OR4D5Q8NGN0 318 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 RNF183Q96D59 192 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 NUDT15Q9NV35 164 aa8.53□□□□□ -1.04
SMARCE1-203ENST00000377808 NBEAL2Q6ZNJ1 2754 aa8.52□□□□□ -1.04
SMARCE1-203ENST00000377808 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.04
SMARCE1-203ENST00000377808 FAM240BA0A1B0GVZ2 78 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 CCSO14618 274 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 BUB3O43684 328 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 RRAS2P62070 204 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 SNRPD3P62318 126 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 ID3Q02535 119 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 ZNF846Q147U1 533 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 DCANP1Q8TF63 244 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 MITD1Q8WV92 249 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 S100ZQ8WXG8 99 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 TRGV9Q99603 122 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 SEC22CQ9BRL7 303 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 NRN1Q9NPD7 142 aa8.52□□□□□ -1.05
SMARCE1-203ENST00000377808 C5orf51A6NDU8 294 aa8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 CXorf65A6NEN9 183 aa8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 THAP8Q8NA92 274 aa8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 ZBTB8BQ8NAP8 495 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 BPIFCQ8NFQ6 507 aa8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 RARRES2Q99969 163 aa8.51□□□□□ -1.05
SMARCE1-203ENST00000377808 LYSTQ99698 3801 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 IGKV1OR2-108A0A075B7D4 117 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 L7N2F9 121 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 H2AFB2P0C5Z0 115 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 METTL15P1P0C7V9 234 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 ORM2P19652 201 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 GATA2P23769 480 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 VAMP2P63027 116 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 OR8I2Q8N0Y5 310 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 TMEM217Q8N7C4 229 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 OR1B1Q8NGR6 318 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 ZNF431Q8TF32 576 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 GATAD1Q8WUU5 269 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 LINC00052Q96N35 136 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 WDR12Q9GZL7 423 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 SLC25A22Q9H936 323 aa8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 RCL1Q9Y2P8 373 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 LSM5Q9Y4Y9 91 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-203ENST00000377808 CCNKO75909 580 aa8.49□□□□□ -1.05
SMARCE1-203ENST00000377808 BCAP31P51572 246 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms