RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C1QTNF5Q9BXJ0 243 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.97
HIF3A-205ENST00000377670 MALP21145 153 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 CIRBPQ14011 172 aaKnown RBP8.97□□□□□ -0.97
HIF3A-205ENST00000377670 SAPCD1Q5SSQ6 148 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 HEPN1Q6WQI6 88 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 NEUROG1Q92886 237 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 LY6G6EA0A0G2JKS1 128 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 LEPP41159 167 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 TMEM170BQ5T4T1 132 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 MRAPQ8TCY5 172 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 NOTCH3Q9UM47 2321 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 U3KQA8 63 aa8.97□□□□□ -0.97
HIF3A-205ENST00000377670 STAG3L3P0CL85 134 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 MINOS1Q5TGZ0 78 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 CFAP161Q6P656 301 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 MINOS1-NBL1R4GNA1 71 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 IGFBP2P18065 325 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.97
HIF3A-205ENST00000377670 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.97
HIF3A-205ENST00000377670 APOMO95445 188 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 KLRD1Q13241 179 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 TMEM158Q8WZ71 300 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 ZGRF1Q86YA3 2104 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 IZUMO1RA6ND01 250 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 TDGF1P13385 188 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 C5orf24Q7Z6I8 188 aa8.96□□□□□ -0.98
HIF3A-205ENST00000377670 PAQR4Q8N4S7 273 aaPredicted RBP8.96□□□□□ -0.98
HIF3A-205ENST00000377670 COLCA2A8K830 154 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 F8VVB4 439 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 F8VWA3 439 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 FGF16O43320 207 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 SUMO2P61956 95 aaKnown RBP8.95□□□□□ -0.98
HIF3A-205ENST00000377670 C5orf30Q96GV9 206 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 RNASE7Q9H1E1 156 aaKnown RBP8.95□□□□□ -0.98
HIF3A-205ENST00000377670 C12orf77C9JDV5 145 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
HIF3A-205ENST00000377670 GPX4P36969 197 aaPredicted RBP8.95□□□□□ -0.98
HIF3A-205ENST00000377670 IL17RELQ6ZVW7 336 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 SLC25A15Q9Y619 301 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 FAM208BQ5VWN6 2430 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 PEX7O00628 323 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 NDUFA3O95167 84 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 CXCL1P09341 107 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
HIF3A-205ENST00000377670 TECTAO75443 2155 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 ASIPP42127 132 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 GATAD1Q8WUU5 269 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 RPP21Q9H633 154 aaKnown RBP8.95□□□□□ -0.98
HIF3A-205ENST00000377670 PGPEP1LA6NFU8 196 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 J3QLI3 93 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 IGFL3Q6UXB1 125 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 WBP1Q96G27 269 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 TM2D1Q9BX74 207 aa8.95□□□□□ -0.98
HIF3A-205ENST00000377670 TRAV9-1A0A075B6T8 112 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 IGLV3-32A0A0A0MS00 114 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 H0YIZ8 118 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 LY6HO94772 140 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 IGHG3P01860 377 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 OR9G9P0C7N8 305 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 LINC00614P0C842 121 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 CCL20P78556 96 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 TMEM95Q3KNT9 176 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 MIR17HGQ75NE6 70 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 LRTM2Q8N967 370 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 C5orf42Q9H799 3197 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 DNAL4O96015 105 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 ATP5IP56385 69 aaPredicted RBP8.94□□□□□ -0.98
HIF3A-205ENST00000377670 DEFB113Q30KQ7 82 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 C18orf12Q96KH6 178 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 RANBP2P49792 3224 aaKnown RBP8.94□□□□□ -0.98
HIF3A-205ENST00000377670 TMEM178BH3BS89 294 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 M0R1W7 72 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 C1QL4Q86Z23 238 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 COPS9Q8WXC6 57 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 NUDT11Q96G61 164 aa8.94□□□□□ -0.98
HIF3A-205ENST00000377670 NHP2Q9NX24 153 aaKnown RBP8.94□□□□□ -0.98
HIF3A-205ENST00000377670 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 TRAV8-2A0A0B4J237 113 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 HIGD1CA8MV81 97 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 IGFBP3P17936 291 aaPredicted RBP8.93□□□□□ -0.98
HIF3A-205ENST00000377670 PAX8Q06710 450 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 OR5A1Q8NGJ0 315 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 TNFRSF14Q92956 283 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 OOSP1A8MZH6 123 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 PAX1P15863 534 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 UCP1P25874 307 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 C1QTNF4Q9BXJ3 329 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 TRAV24A0A0B4J272 114 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 A0A1B0GUT8 65 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 AMBPP02760 352 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 CD5P06127 495 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 WDR82Q6UXN9 313 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms