RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LRRC30A6NM36 301 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 Q8IYB0 196 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 PMS2P5A8MQ11 134 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 TCL1AP56279 114 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 V9GYV3 84 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 MPV17P39210 176 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 ZNF497Q6ZNH5 498 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 Q8TCH9 128 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 KLF14Q8TD94 323 aaPredicted RBP12.64□□□□□ -0.39
FXN-201ENST00000377270 OBP2BQ9NPH6 170 aa12.64□□□□□ -0.39
FXN-201ENST00000377270 TRAV17A0A0B4J275 112 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 IGLV2-14P01704 120 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 GUSBP1Q15486 140 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 IGFL2Q6UWQ7 119 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 CFAP47Q6ZTR5 3102 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 SSX8Q7RTT4 187 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 LIN7CQ9NUP9 197 aaKnown RBP12.63□□□□□ -0.39
FXN-201ENST00000377270 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 SMIM13P0DJ93 91 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 FGFRL1Q8N441 504 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 OR4A16Q8NH70 328 aa12.63□□□□□ -0.39
FXN-201ENST00000377270 DSPP15924 2871 aaKnown RBP12.62□□□□□ -0.39
FXN-201ENST00000377270 CXorf67Q86X51 503 aaPredicted RBP12.62□□□□□ -0.39
FXN-201ENST00000377270 SPACA3Q8IXA5 215 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 TRBV20-1A0A075B6N2 111 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 H3BMG7 143 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 APOMO95445 188 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 FGF6P10767 208 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
FXN-201ENST00000377270 FOXF2Q12947 444 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 WDR31Q8NA23 367 aa12.62□□□□□ -0.39
FXN-201ENST00000377270 FOXI1Q12951 378 aa12.61□□□□□ -0.39
FXN-201ENST00000377270 NPIPB11E5RHQ5 1161 aa12.61□□□□□ -0.39
FXN-201ENST00000377270 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.61□□□□□ -0.39
FXN-201ENST00000377270 RPL8P62917 257 aaKnown RBP12.61□□□□□ -0.39
FXN-201ENST00000377270 ZNF826PQ6ZT77 177 aa12.61□□□□□ -0.39
FXN-201ENST00000377270 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
FXN-201ENST00000377270 LY96Q9Y6Y9 160 aa12.61□□□□□ -0.39
FXN-201ENST00000377270 CXorf1O96002 111 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 IGKV3-15P01624 115 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
FXN-201ENST00000377270 Q8N7P7 452 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 C8orf46Q8TAG6 207 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 FZR1Q9UM11 496 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
FXN-201ENST00000377270 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 WNT9BO14905 357 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 ARL14EPLP0DKL9 152 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 HOXA4Q00056 320 aaPredicted RBP12.6□□□□□ -0.39
FXN-201ENST00000377270 ZADH2Q8N4Q0 377 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 SAP30LQ9HAJ7 183 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 DMXL1Q9Y485 3027 aa12.6□□□□□ -0.39
FXN-201ENST00000377270 C9JCJ5 164 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 NDUFV3P56181 108 aaKnown RBP12.59□□□□□ -0.39
FXN-201ENST00000377270 RPL31P62899 125 aaKnown RBP12.59□□□□□ -0.39
FXN-201ENST00000377270 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
FXN-201ENST00000377270 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 URB1-AS1Q96HZ7 61 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 PRELID3AQ96N28 172 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 SVILO95425 2214 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.59□□□□□ -0.39
FXN-201ENST00000377270 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 PSPNO60542 156 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 PPIFP30405 207 aaKnown RBP12.59□□□□□ -0.39
FXN-201ENST00000377270 G6PCP35575 357 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 MFAP4P55083 255 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 EDDM3BP56851 147 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 GAGE13Q4V321 117 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 ZNF502Q8TBZ5 544 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 INSIG2Q9Y5U4 225 aa12.59□□□□□ -0.39
FXN-201ENST00000377270 A1L4Q6 167 aa12.58□□□□□ -0.39
FXN-201ENST00000377270 TIMM8AO60220 97 aaPredicted RBP12.58□□□□□ -0.39
FXN-201ENST00000377270 CECR9P0C854 216 aa12.58□□□□□ -0.39
FXN-201ENST00000377270 GLRXP35754 106 aa12.58□□□□□ -0.39
FXN-201ENST00000377270 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.39
FXN-201ENST00000377270 TEPPQ6URK8 271 aa12.58□□□□□ -0.39
FXN-201ENST00000377270 TMEM116Q8NCL8 245 aa12.58□□□□□ -0.39
FXN-201ENST00000377270 H1FXQ92522 213 aaKnown RBP12.58□□□□□ -0.39
FXN-201ENST00000377270 ZG16O60844 167 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 C11orf53Q8IXP5 236 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 K7ERJ3 54 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 CLDN14O95500 239 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 FXYD3Q14802 87 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 ZNF718Q3SXZ3 478 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 KIR2DL4Q99706 377 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 CXXC4Q9H2H0 198 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms