RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ACY3Q96HD9 319 aa10.7□□□□□ -0.7
HDAC6-204ENST00000376643 SLC35E1Q96K37 410 aa10.7□□□□□ -0.7
HDAC6-204ENST00000376643 MIXL1Q9H2W2 232 aa10.7□□□□□ -0.7
HDAC6-204ENST00000376643 CCDC59Q9P031 241 aaKnown RBP10.7□□□□□ -0.7
HDAC6-204ENST00000376643 APLNQ9ULZ1 77 aa10.7□□□□□ -0.7
HDAC6-204ENST00000376643 DUXBA0A1W2PPF3 345 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
HDAC6-204ENST00000376643 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 SMIM18P0DKX4 95 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 AKR1C4P17516 323 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 GPX4P36969 197 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-204ENST00000376643 KLF9Q13886 244 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-204ENST00000376643 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
HDAC6-204ENST00000376643 USF2Q15853 346 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-204ENST00000376643 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 SPATA31B1PQ5VZV4 182 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 HSPB7Q9UBY9 170 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 X6R8D5 127 aa10.69□□□□□ -0.7
HDAC6-204ENST00000376643 IGHV4-4A0A075B6R2 117 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 ANKRD20A5PA0PJZ0 165 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 ZFP92A6NM28 416 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 CTDSP2O14595 271 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 CFDP00746 253 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-204ENST00000376643 AMBPP02760 352 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 RPP30P78346 268 aaKnown RBP10.68□□□□□ -0.7
HDAC6-204ENST00000376643 Q6ZTC4 211 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 NEU1Q99519 415 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
HDAC6-204ENST00000376643 H3BMM0 161 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 P0DMU3 169 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 FAM231AP0DMU4 169 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 FAM231CP0DMU5 169 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 PSG1P11464 419 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 AP3S2P59780 193 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 RAB11AP62491 216 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 OR1S1Q8NH92 325 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 COQ8AQ8NI60 647 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 CLUHP3Q96NS8 147 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 NDUFAF3Q9BU61 184 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 PBDC1Q9BVG4 233 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 CLEC5AQ9NY25 188 aa10.67□□□□□ -0.7
HDAC6-204ENST00000376643 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-204ENST00000376643 DEFB131BA0A096LNP1 70 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 SNRPGP15A8MWD9 76 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 MED6O75586 246 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 ALDH3B2P48448 385 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 PSMB3P49720 205 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 MEOX2P50222 304 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 TMBIM6P55061 237 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 SUPT4H1P63272 117 aaKnown RBP10.66□□□□□ -0.7
HDAC6-204ENST00000376643 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 DEDD2Q8WXF8 326 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 PPP1R14BQ96C90 147 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 FAM210BQ96KR6 192 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 CIB3Q96Q77 187 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-204ENST00000376643 XCL2Q9UBD3 114 aa10.66□□□□□ -0.7
HDAC6-204ENST00000376643 NXPH3O95157 252 aa10.65□□□□□ -0.7
HDAC6-204ENST00000376643 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
HDAC6-204ENST00000376643 SPCS2Q15005 226 aa10.65□□□□□ -0.7
HDAC6-204ENST00000376643 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.7
HDAC6-204ENST00000376643 RBKSQ9H477 322 aa10.65□□□□□ -0.7
HDAC6-204ENST00000376643 SLC25A6P12236 298 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 PRR20EP86478 221 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 PRR20CP86479 221 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 PRR20DP86480 221 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 PRR20BP86481 221 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 PRR20AP86496 221 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 EBLN2Q6P2I7 272 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 DYNC2LI1Q8TCX1 351 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 TRGV9Q99603 122 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 SAV1Q9H4B6 383 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-204ENST00000376643 GOLT1BQ9Y3E0 138 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 RFNGQ9Y644 331 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 KMT2AQ03164 3969 aa10.64□□□□□ -0.71
HDAC6-204ENST00000376643 FABP12A6NFH5 140 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 ISLRO14498 428 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 LYZP61626 148 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 GAMTQ14353 236 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 TMEM128Q5BJH2 165 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 ZNF705AQ6ZN79 300 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-204ENST00000376643 LYZL2Q7Z4W2 148 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 OR8I2Q8N0Y5 310 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 LINC00052Q96N35 136 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
HDAC6-204ENST00000376643 ZNF705FA8MVS1 300 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-204ENST00000376643 ZNF705DP0CH99 300 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-204ENST00000376643 ZNF705BP0CI00 300 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-204ENST00000376643 GALR1P47211 349 aa10.62□□□□□ -0.71
HDAC6-204ENST00000376643 POM121L12Q8N7R1 296 aa10.62□□□□□ -0.71
HDAC6-204ENST00000376643 GPR82Q96P67 336 aa10.62□□□□□ -0.71
HDAC6-204ENST00000376643 SLC25A21Q9BQT8 299 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-204ENST00000376643 TMED3Q9Y3Q3 217 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms