RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ETFRF1Q6IPR1 90 aa10.7□□□□□ -0.7
CLCN6-204ENST00000376491 ZNF705AQ6ZN79 300 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-204ENST00000376491 POM121L12Q8N7R1 296 aa10.7□□□□□ -0.7
CLCN6-204ENST00000376491 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
CLCN6-204ENST00000376491 MUC4Q99102 2169 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 DISC1C4P0D8 188 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 FXYD7P58549 80 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 GSG1LQ6UXU4 331 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 SMIM4Q8WVI0 70 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 NEU1Q99519 415 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 WDR12Q9GZL7 423 aaKnown RBP10.69□□□□□ -0.7
CLCN6-204ENST00000376491 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
CLCN6-204ENST00000376491 ZNF705FA8MVS1 300 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-204ENST00000376491 M0R2N4 97 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 RTL8CO15255 209 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 GSTZ1O43708 216 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-204ENST00000376491 IFNA10P01566 189 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 ZNF705DP0CH99 300 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-204ENST00000376491 ZNF705BP0CI00 300 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-204ENST00000376491 SULT1A3P0DMM9 295 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 SULT1A4P0DMN0 295 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 P0DMU3 169 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 NKX2-1P43699 371 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-204ENST00000376491 MRPS10P82664 201 aaKnown RBP10.68□□□□□ -0.7
CLCN6-204ENST00000376491 OR51S1Q8NGJ8 323 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 IL22RA2Q969J5 263 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 NDUFAF3Q9BU61 184 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 PKHD1P08F94 4074 aa10.68□□□□□ -0.7
CLCN6-204ENST00000376491 IGKV1D-37A0A075B6S9 117 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 RGS5O15539 181 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 IGKV3-20P01619 116 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 AKAIN1P0CW23 69 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 ZNF90Q03938 601 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 NOXA1Q86UR1 476 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 RBKSQ9H477 322 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 HSPB7Q9UBY9 170 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 U3KQ87 197 aa10.67□□□□□ -0.7
CLCN6-204ENST00000376491 SOCS3O14543 225 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 CTDSPLO15194 276 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 EMP1P54849 157 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 KLF9Q13886 244 aaPredicted RBP10.66□□□□□ -0.7
CLCN6-204ENST00000376491 GAMTQ14353 236 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 SPCS2Q15005 226 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 LGI3Q8N145 548 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 ZNF709Q8N972 641 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 DTD1Q8TEA8 209 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 LINC00052Q96N35 136 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 PRRT1Q99946 306 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
CLCN6-204ENST00000376491 SAV1Q9H4B6 383 aaPredicted RBP10.66□□□□□ -0.7
CLCN6-204ENST00000376491 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 SMIM9A6NGZ8 99 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 CCR6P51684 374 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 SUPT4H1P63272 117 aaKnown RBP10.65□□□□□ -0.7
CLCN6-204ENST00000376491 SMCO1Q147U7 214 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 OR8G2PQ6IF36 304 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 FOXI2Q6ZQN5 318 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 LYZL2Q7Z4W2 148 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 CLVS1Q8IUQ0 354 aaPredicted RBP10.65□□□□□ -0.7
CLCN6-204ENST00000376491 PLA2G2EQ9NZK7 142 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 CACFD1Q9UGQ2 172 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 KCNIP3Q9Y2W7 256 aa10.65□□□□□ -0.7
CLCN6-204ENST00000376491 A0A0B4J2A0 478 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 ANKRD20A5PA0PJZ0 165 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 ZFP92A6NM28 416 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 IL18Q14116 193 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 DIRAS2Q96HU8 199 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 CLUHP3Q96NS8 147 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 SLC35B3Q9H1N7 401 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 DKK2Q9UBU2 259 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 SHPKQ9UHJ6 478 aa10.64□□□□□ -0.71
CLCN6-204ENST00000376491 PKD1P98161 4303 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 F6UB75 175 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 GPX4P36969 197 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-204ENST00000376491 NUP62P37198 522 aaPredicted RBP10.63□□□□□ -0.71
CLCN6-204ENST00000376491 ID1P41134 155 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 ALDH3B2P48448 385 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 PSMB3P49720 205 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 LYZP61626 148 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 OR2F1Q13607 317 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 ZNF79Q15937 498 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 FAM222AQ5U5X8 452 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 C1orf158Q8N1D5 194 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 OR4B1Q8NGF8 309 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 RFNGQ9Y644 331 aa10.63□□□□□ -0.71
CLCN6-204ENST00000376491 IGLV2-18A0A075B6J9 118 aa10.62□□□□□ -0.71
CLCN6-204ENST00000376491 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
CLCN6-204ENST00000376491 AKR1C4P17516 323 aa10.62□□□□□ -0.71
CLCN6-204ENST00000376491 PAX9P55771 341 aa10.62□□□□□ -0.71
CLCN6-204ENST00000376491 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
CLCN6-204ENST00000376491 Q6ZR54 194 aa10.62□□□□□ -0.71
CLCN6-204ENST00000376491 SLC35E1Q96K37 410 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms