RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
CLCN6-203ENST00000376490 C16orf54Q6UWD8 224 aa10.52□□□□□ -0.73
CLCN6-203ENST00000376490 Q6ZWC4 215 aa10.52□□□□□ -0.73
CLCN6-203ENST00000376490 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.73
CLCN6-203ENST00000376490 KIR2DL5BQ8NHK3 375 aa10.52□□□□□ -0.73
CLCN6-203ENST00000376490 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
CLCN6-203ENST00000376490 KMT2CQ8NEZ4 4911 aaKnown RBP10.51□□□□□ -0.73
CLCN6-203ENST00000376490 TRAV6A0A075B6T7 132 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 PRSS46E5RG02 174 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 H3BP45 60 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 UBE2CO00762 179 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 SPRY2O43597 315 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
CLCN6-203ENST00000376490 OR4D5Q8NGN0 318 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 MITD1Q8WV92 249 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
CLCN6-203ENST00000376490 IGKV1OR2-108A0A075B7D4 117 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 BUB3O43684 328 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 NKX2-1P43699 371 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-203ENST00000376490 OR2F1Q13607 317 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 LINC00299Q6ZSB3 139 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 RNF183Q96D59 192 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 RNF125Q96EQ8 232 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 CCDC32Q9BV29 185 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 PBDC1Q9BVG4 233 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
CLCN6-203ENST00000376490 STRAPQ9Y3F4 350 aaKnown RBP10.5□□□□□ -0.73
CLCN6-203ENST00000376490 HELTA6NFD8 242 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 SNRPGP15A8MWD9 76 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 PAX9P55771 341 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 IAH1Q2TAA2 248 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-203ENST00000376490 THAP8Q8NA92 274 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 TRGV9Q99603 122 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 PSENENQ9NZ42 101 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 GSKIPQ9P0R6 139 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
CLCN6-203ENST00000376490 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 SSSCA1O60232 199 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 SCGB1D2O95969 90 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 EIF2B2P49770 351 aaKnown RBP10.48□□□□□ -0.73
CLCN6-203ENST00000376490 AP2S1P53680 142 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-203ENST00000376490 ZBTB8BQ8NAP8 495 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-203ENST00000376490 S100ZQ8WXG8 99 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 SEC22CQ9BRL7 303 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 NUDT15Q9NV35 164 aa10.48□□□□□ -0.73
CLCN6-203ENST00000376490 CCSO14618 274 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 CCNKO75909 580 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 FABP1P07148 127 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 H2AFB2P0C5Z0 115 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 LYZP61626 148 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 OR8G2PQ6IF36 304 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 TBC1D24Q9ULP9 559 aa10.47□□□□□ -0.73
CLCN6-203ENST00000376490 A0A0J9YWU9 116 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 FAM240BA0A1B0GVZ2 78 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 KNCNA6PVL3 124 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 PMS2P5A8MQ11 134 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 GATA2P23769 480 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-203ENST00000376490 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLCN6-203ENST00000376490 TMEM182Q6ZP80 229 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-203ENST00000376490 ACOT7LQ6ZUV0 252 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 STHQ8IWL8 128 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 IL17DQ8TAD2 202 aa10.46□□□□□ -0.73
CLCN6-203ENST00000376490 ZNF431Q8TF32 576 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-203ENST00000376490 MBPP02686 304 aaPredicted RBP10.45□□□□□ -0.74
CLCN6-203ENST00000376490 METTL15P1P0C7V9 234 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 AKR1C1Q04828 323 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 PSMG4Q5JS54 123 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 MZT2BQ6NZ67 158 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 TMEM14EPQ6UXP3 125 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 GSG1LQ6UXU4 331 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 C12orf45Q8N5I9 185 aaPredicted RBP10.45□□□□□ -0.74
CLCN6-203ENST00000376490 RAB40CQ96S21 281 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 PFDN2Q9UHV9 154 aa10.45□□□□□ -0.74
CLCN6-203ENST00000376490 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
CLCN6-203ENST00000376490 SMCO3A2RU48 225 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 FAM25EA8MYX2 175 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 CA1P00915 261 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-203ENST00000376490 RRAS2P62070 204 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-203ENST00000376490 IFITM3Q01628 133 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 ASAH1Q13510 395 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 ZNF846Q147U1 533 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 ACTL10Q5JWF8 245 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 TMEM144Q7Z5S9 345 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
CLCN6-203ENST00000376490 PPP1R14BQ96C90 147 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 RARRES2Q99969 163 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 PTTG2Q9NZH5 202 aa10.44□□□□□ -0.74
CLCN6-203ENST00000376490 C7orf66A4D0T2 115 aa10.43□□□□□ -0.74
CLCN6-203ENST00000376490 C5orf51A6NDU8 294 aa10.43□□□□□ -0.74
CLCN6-203ENST00000376490 UPK1BO75841 260 aa10.43□□□□□ -0.74
CLCN6-203ENST00000376490 CFDP00746 253 aaPredicted RBP10.43□□□□□ -0.74
CLCN6-203ENST00000376490 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
CLCN6-203ENST00000376490 ORM2P19652 201 aa10.43□□□□□ -0.74
CLCN6-203ENST00000376490 NUP62P37198 522 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms