RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 SPATA45Q537H7 98 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 ZNF841Q6ZN19 808 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 C19orf35Q6ZS72 473 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 TRGV9Q99603 122 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 RPH3ALQ9UNE2 315 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 RPL27AP46776 148 aaKnown RBP11.66□□□□□ -0.54
MSH5-201ENST00000375703 CAMPP49913 170 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 C11orf42Q8N5U0 333 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 DMXL1Q9Y485 3027 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 HYPMO75409 117 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 GPR6P46095 362 aaPredicted RBP11.66□□□□□ -0.54
MSH5-201ENST00000375703 GPR82Q96P67 336 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 C7orf69Q9H7B7 122 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 CNTFRP26992 372 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 CTRLP40313 264 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 BATFQ16520 125 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 GFRALQ6UXV0 394 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 ABHD17AQ96GS6 310 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
MSH5-201ENST00000375703 JKAMPQ9P055 326 aa11.66□□□□□ -0.54
MSH5-201ENST00000375703 MGAQ8IWI9 3026 aa11.65□□□□□ -0.54
MSH5-201ENST00000375703 PVRIGQ6DKI7 326 aa11.65□□□□□ -0.54
MSH5-201ENST00000375703 TMEM116Q8NCL8 245 aa11.65□□□□□ -0.54
MSH5-201ENST00000375703 WNT10AQ9GZT5 417 aa11.65□□□□□ -0.54
MSH5-201ENST00000375703 HSBP1O75506 76 aa11.65□□□□□ -0.55
MSH5-201ENST00000375703 FAM87AP0C7U9 286 aa11.65□□□□□ -0.55
MSH5-201ENST00000375703 COTL1Q14019 142 aa11.65□□□□□ -0.55
MSH5-201ENST00000375703 SMIM12Q96EX1 92 aa11.65□□□□□ -0.55
MSH5-201ENST00000375703 ROS1P08922 2347 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 VWC2LB2RUY7 222 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 E7EQL1 145 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 DLX1P56177 255 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 SSX8Q7RTT4 187 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 ALKBH7Q9BT30 221 aaPredicted RBP11.64□□□□□ -0.55
MSH5-201ENST00000375703 INSIG2Q9Y5U4 225 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 IGHV1-69-2A0A0G2JMI3 117 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 A6NNC1 897 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 CA7P43166 264 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 KLF5Q13887 457 aaPredicted RBP11.64□□□□□ -0.55
MSH5-201ENST00000375703 LEMD1Q68G75 181 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 PRSS33Q8NF86 280 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 C8orf46Q8TAG6 207 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 MLST8Q9BVC4 326 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 NGBQ9NPG2 151 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 SIGLEC9Q9Y336 463 aa11.64□□□□□ -0.55
MSH5-201ENST00000375703 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 H3BTX0 84 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 OR2J3O76001 311 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 CRYGBP07316 175 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 PRB3Q04118 309 aaPredicted RBP11.63□□□□□ -0.55
MSH5-201ENST00000375703 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 CLEC7AQ9BXN2 247 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 GSX1Q9H4S2 264 aaPredicted RBP11.63□□□□□ -0.55
MSH5-201ENST00000375703 TOMM40O96008 361 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
MSH5-201ENST00000375703 C5orf17Q8NAS9 161 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 ZNF835Q9Y2P0 537 aa11.63□□□□□ -0.55
MSH5-201ENST00000375703 NAV3Q8IVL0 2385 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 IGHV2-26A0A0B4J1V2 119 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 M0R2Z0 102 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 GP9P14770 177 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 TNFRSF14Q92956 283 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 FMC1Q96HJ9 113 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 Q9H3A6 140 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 RPP21Q9H633 154 aaKnown RBP11.62□□□□□ -0.55
MSH5-201ENST00000375703 UQCR10Q9UDW1 63 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 RALYQ9UKM9 306 aaKnown RBP11.62□□□□□ -0.55
MSH5-201ENST00000375703 A8MWL6 223 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 RNASEKQ6P5S7 137 aaKnown RBP11.62□□□□□ -0.55
MSH5-201ENST00000375703 PPP1R27Q86WC6 154 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 TMEM208Q9BTX3 173 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 PRSS22Q9GZN4 317 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 PLXNB1O43157 2135 aa11.62□□□□□ -0.55
MSH5-201ENST00000375703 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 IGLV1-47P01700 117 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 P01737 135 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 TCRAP04437 139 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 NPSP0C0P6 89 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 IGLC3P0DOY3 106 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 PLP1P60201 277 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 ATOH7Q8N100 152 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
MSH5-201ENST00000375703 TXN2Q99757 166 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 LPAR2Q9HBW0 351 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 F11RQ9Y624 299 aaKnown RBP11.61□□□□□ -0.55
MSH5-201ENST00000375703 CEP250Q9BV73 2442 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 LTAP01374 205 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 APOBEC3AP31941 199 aaPredicted RBP11.61□□□□□ -0.55
MSH5-201ENST00000375703 MMDQ15546 238 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 LCN12Q6JVE5 192 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms