RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SH3BGRL2Q9UJC5 107 aa11.39□□□□□ -0.59
CLCNKA-202ENST00000375692 MRPS16Q9Y3D3 137 aaKnown RBP11.39□□□□□ -0.59
CLCNKA-202ENST00000375692 IGHV2-26A0A0B4J1V2 119 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 ERHP84090 104 aaKnown RBP11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 SAP30LQ9HAJ7 183 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 H0YJW9 148 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 DIAPH2-AS1Q14236 149 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 LINC00322Q6ZN03 302 aaPredicted RBP11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 ERASQ7Z444 233 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 OR4F17Q8NGA8 305 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 CACNG8Q8WXS5 425 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF714Q96N38 554 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 NCOR1P1Q9H4R4 102 aa11.38□□□□□ -0.59
CLCNKA-202ENST00000375692 IGKV1D-37A0A075B6S9 117 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 CGB1A6NKQ9 187 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 FSTL3O95633 263 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 GLRXP35754 106 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 UCNP55089 124 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 TNFAIP6P98066 277 aaPredicted RBP11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 RASL11AQ6T310 242 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 C7orf69Q9H7B7 122 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 H3BTX0 84 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 CCL3L1P16619 93 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 ORM2P19652 201 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF474Q6S9Z5 364 aaPredicted RBP11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 LINC00305Q7Z4B0 112 aa11.37□□□□□ -0.59
CLCNKA-202ENST00000375692 IGHV1-46P01743 117 aa11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 ATP5IP56385 69 aaPredicted RBP11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 PGPA6NDG6 321 aa11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 OR2J3O76001 311 aa11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 C22orf34Q6ZV56 151 aa11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 SSX8Q7RTT4 187 aa11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF430Q9H8G1 570 aaPredicted RBP11.36□□□□□ -0.59
CLCNKA-202ENST00000375692 TCRBV4S1A1TA0A5B7 111 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 NKX6-3A6NJ46 265 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 MOSP00540 346 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF833PQ6ZTB9 187 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 OR1L4Q8NGR5 311 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 EPDR1Q9UM22 224 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 DYSFO75923 2080 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 A0A1B0GXF2 115 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 IGLC7A0M8Q6 106 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 MBD3L4A6NDZ8 208 aaPredicted RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 MBD3L3A6NE82 208 aaPredicted RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 MBD3L5A6NJ08 208 aaPredicted RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 APOA2P02652 100 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 LY6DQ14210 128 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 LEMD1Q68G75 181 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 GFRALQ6UXV0 394 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 MBD3L2Q8NHZ7 208 aaPredicted RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 FAM57AQ8TBR7 257 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF596Q8TC21 504 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 PGLYRP4Q96LB8 373 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 MCRIP2Q9BUT9 160 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 LINC00574Q9H8X3 128 aa11.35□□□□□ -0.59
CLCNKA-202ENST00000375692 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 APELAP0DMC3 54 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 MYCNOSP40205 109 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 GATA4P43694 442 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 ZNF137PP52743 207 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 PDPNQ86YL7 162 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 MUC15Q8N387 334 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 FAM169BQ8N8A8 192 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 OR1B1Q8NGR6 318 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 GTSF1Q8WW33 167 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 TMEM70Q9BUB7 260 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 POLEQ07864 2286 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 IGHV3-21A0A0B4J1V1 117 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 hDV102S1A0JD36 115 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 TOMM40O96008 361 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 CCL8P80075 99 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 RITA1Q96K30 269 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
CLCNKA-202ENST00000375692 hADV38S2A0JD32 116 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 CA7P43166 264 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 ZNF138P52744 262 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 BPIFB3P59826 476 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 C1orf185Q5T7R7 199 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 HCP5Q6MZN7 132 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 LOC105371242A0A075B767 164 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 C22orf46C9J442 243 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 RBX1P62877 108 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 TIMM23BQ5SRD1 257 aa11.33□□□□□ -0.6
CLCNKA-202ENST00000375692 OR5AN1Q8NGI8 311 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms