RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 BCAP31P51572 246 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 CD300EQ496F6 205 aaPredicted RBP9.1□□□□□ -0.95
LSM2-208ENST00000375661 FAM106AQ4KMX7 169 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 OR8G2PQ6IF36 304 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 ACOT7LQ6ZUV0 252 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 CHAC2Q8WUX2 184 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 TMEM190Q8WZ59 177 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 SLC35E1Q96K37 410 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
LSM2-208ENST00000375661 TECRQ9NZ01 308 aaKnown RBP9.1□□□□□ -0.95
LSM2-208ENST00000375661 IGKV1OR2-108A0A075B7D4 117 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 ZNF320A2RRD8 509 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 CST7O76096 145 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 LY6G6CO95867 125 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 CD7P09564 240 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 GIPP09681 153 aaPredicted RBP9.09□□□□□ -0.95
LSM2-208ENST00000375661 OR10J1P30954 320 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 P2RY1P47900 373 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 DLK1P80370 383 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 RELQ04864 619 aaPredicted RBP9.09□□□□□ -0.95
LSM2-208ENST00000375661 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 Q5BKY6 102 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 TOMM20LQ6UXN7 152 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 DEFB125Q8N687 156 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 THAP8Q8NA92 274 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 OR10P1Q8NGE3 313 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 OR1S2Q8NGQ3 325 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 DYNLRB2Q8TF09 96 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 MBD2Q9UBB5 411 aa9.09□□□□□ -0.95
LSM2-208ENST00000375661 PLECQ15149 4684 aaKnown RBP9.09□□□□□ -0.95
LSM2-208ENST00000375661 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 TMEM213A2RRL7 107 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 NUPR2A6NF83 97 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 C2orf70A6NJV1 201 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 A8MWP6 167 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 SULT1A1P50225 295 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 YPEL3P61236 119 aaPredicted RBP9.08□□□□□ -0.96
LSM2-208ENST00000375661 DEFB114Q30KQ6 69 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 ASB13Q8WXK3 278 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 GGACTQ9BVM4 153 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
LSM2-208ENST00000375661 PUS1Q9Y606 427 aaKnown RBP eCLIP9.08□□□□□ -0.96
LSM2-208ENST00000375661 FNDC10F2Z333 226 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 G3V3Q6 166 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 K7EMT4 169 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
LSM2-208ENST00000375661 YIF1AO95070 293 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 PET100P0DJ07 73 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 C8orf88P0DMB2 117 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 ELLP55199 621 aaPredicted RBP9.07□□□□□ -0.96
LSM2-208ENST00000375661 RAP2BP61225 183 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 EWSR1Q01844 656 aaKnown RBP eCLIP9.07□□□□□ -0.96
LSM2-208ENST00000375661 NHLH2Q02577 135 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 SLC38A11Q08AI6 406 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 TMEM217Q8N7C4 229 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 TRGV9Q99603 122 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 UFC1Q9Y3C8 167 aa9.07□□□□□ -0.96
LSM2-208ENST00000375661 SMCO3A2RU48 225 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 ZFP92A6NM28 416 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 TOMM40O96008 361 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 FOLR2P14207 255 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 CBLN1P23435 193 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 ZNF90Q03938 601 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 GUCA2BQ16661 112 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 TMEM182Q6ZP80 229 aaPredicted RBP9.06□□□□□ -0.96
LSM2-208ENST00000375661 STX12Q86Y82 276 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 THAP6Q8TBB0 222 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 Q8WTZ3 238 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 OVOL2Q9BRP0 275 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 SLC25A31Q9H0C2 315 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 WFDC10AQ9H1F0 79 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 NPVFQ9HCQ7 196 aa9.06□□□□□ -0.96
LSM2-208ENST00000375661 CXorf65A6NEN9 183 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 SCAF4O95104 1147 aaKnown RBP9.05□□□□□ -0.96
LSM2-208ENST00000375661 RD3LP0DJH9 198 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 PSG1P11464 419 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 ATF4P18848 351 aaPredicted RBP9.05□□□□□ -0.96
LSM2-208ENST00000375661 S100A11P31949 105 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 AKR1C1Q04828 323 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 VWC2Q2TAL6 325 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 OR2T35Q8NGX2 323 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 GGTLC1Q9BX51 225 aa9.05□□□□□ -0.96
LSM2-208ENST00000375661 DAZ1Q9NQZ3 744 aaKnown RBP9.05□□□□□ -0.96
LSM2-208ENST00000375661 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
LSM2-208ENST00000375661 LOC102724200A0A096LPH7 203 aaPredicted RBP9.04□□□□□ -0.96
LSM2-208ENST00000375661 IGHV7-4-1A0A0J9YVY3 117 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 GATA2P23769 480 aaPredicted RBP9.04□□□□□ -0.96
LSM2-208ENST00000375661 RPL12P30050 165 aaKnown RBP9.04□□□□□ -0.96
LSM2-208ENST00000375661 BAXQ07812 192 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 FGL1Q08830 312 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 OR2F1Q13607 317 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
LSM2-208ENST00000375661 ATP6V1FQ16864 119 aa9.04□□□□□ -0.96
LSM2-208ENST00000375661 CEMP1Q6PRD7 247 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 2030.6 ms