RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ATXN7O15265 892 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-204ENST00000375290 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 FLVCR1-AS1Q8TAF5 88 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 NABP1Q96AH0 204 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 TMEM133Q9H2Q1 129 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 SLC25A45Q8N413 288 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 PIMREGQ9BSJ6 248 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 FNDC1Q4ZHG4 1894 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-204ENST00000375290 C3orf36Q3SXR2 165 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 ZNF826PQ6ZT77 177 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 CENPVQ7Z7K6 275 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-204ENST00000375290 TRBV7-9A0A0J9YWB2 115 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 PSMB11A5LHX3 300 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 NKX2-8O15522 239 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 AGFG2O95081 481 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 TIAF1O95411 115 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 VCYO14598 125 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 SLC25A16P16260 332 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 GFRA1P56159 465 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 RLFQ13129 1914 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 MYF5P13349 255 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 PSG7Q13046 419 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 RFNGQ9Y644 331 aa8.44□□□□□ -1.06
PTCH1-204ENST00000375290 UTF1Q5T230 341 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 RPUSD1Q9UJJ7 312 aaKnown RBP8.43□□□□□ -1.06
PTCH1-204ENST00000375290 IGKV1D-43A0A0B4J1Z2 117 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 DPH3P1Q9H4G8 78 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 PEMTQ9UBM1 199 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 TRAV5A0A0B4J249 113 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 HAX1O00165 279 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 PNRC2Q9NPJ4 139 aaKnown RBP8.43□□□□□ -1.06
PTCH1-204ENST00000375290 K7EP13 123 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 TNRC6AQ8NDV7 1962 aaKnown RBP8.43□□□□□ -1.06
PTCH1-204ENST00000375290 HEATR5AQ86XA9 2040 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 GFRA3O60609 400 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 MBNL3Q9NUK0 354 aaKnown RBP8.43□□□□□ -1.06
PTCH1-204ENST00000375290 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 LYZL4Q96KX0 146 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 EGR1P18146 543 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 MINOS1Q5TGZ0 78 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 RPP25Q9BUL9 199 aaKnown RBP8.43□□□□□ -1.06
PTCH1-204ENST00000375290 MINOS1-NBL1R4GNA1 71 aa8.43□□□□□ -1.06
PTCH1-204ENST00000375290 PRR32B1ATL7 298 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 IL17RELQ6ZVW7 336 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 C18orf32Q8TCD1 76 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 ZNF48Q96MX3 618 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-204ENST00000375290 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 A0A1W2PPE3 182 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 IL18BPO95998 194 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 D6R8Y8 96 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 VKORC1Q9BQB6 163 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 SEPSECSQ9HD40 501 aaKnown RBP8.42□□□□□ -1.06
PTCH1-204ENST00000375290 NLRC5Q86WI3 1866 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 M0R381 172 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 SRD5A1P18405 259 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 VWA8A3KMH1 1905 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 C17orf100A8MU93 164 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 TDGF1P13385 188 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 LMO1P25800 156 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 PPP1R32Q7Z5V6 425 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 LOC101059948A0A1B0GTJ6 334 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 ZNRF1Q8ND25 227 aa8.42□□□□□ -1.06
PTCH1-204ENST00000375290 DTX2Q86UW9 622 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 TRBV7-1A0A0A6YYK4 115 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 IGKV1-5P01602 117 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 CECR9P0C854 216 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 NDUFA3O95167 84 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 TMEM256Q8N2U0 113 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 HGFACQ04756 655 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 KLF5Q13887 457 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-204ENST00000375290 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 MUC21A0A0G2JKD1 596 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 MUC21A0A140T8X8 626 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 FBXL7Q9UJT9 491 aa8.41□□□□□ -1.06
PTCH1-204ENST00000375290 ZNF138P52744 262 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 SLAQ13239 276 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 KLK15Q9H2R5 256 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 H3BQ85 93 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 HILPDAQ9Y5L2 63 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 RTTNQ86VV8 2226 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-204ENST00000375290 CRPP02741 224 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 NRTNQ99748 197 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 Q6ZVH6 145 aa8.4□□□□□ -1.06
PTCH1-204ENST00000375290 BEX4Q9NWD9 120 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-204ENST00000375290 IL15RAQ13261 267 aa8.4□□□□□ -1.07
PTCH1-204ENST00000375290 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.07
PTCH1-204ENST00000375290 NUP37Q8NFH4 326 aa8.4□□□□□ -1.07
PTCH1-204ENST00000375290 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.07
PTCH1-204ENST00000375290 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.07
PTCH1-204ENST00000375290 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 FAM74A4Q5TZK3 123 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 ATRXP46100 2492 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 EREGO14944 169 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms